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Data from: Population scale mapping of transposable element diversity reveals links to gene regulation and epigenomic variation
负责人:
关键词:
Arabidopsis;genomics;DNA methylation;Transposable elements;epigenetics
DOI:
doi:10.5061/dryad.187b3
摘要:
Variation in the presence or absence of transposable elements (TEs) is a major source of genetic variation between individuals. Here, we identified
Data from: Genome-wide identification of microsatellites and transposable elements in the dromedary camel genome using whole genome sequencing data
负责人:
关键词:
Breeding strategies;Repetitive sequence;microsatellites;Next-generation sequencing;Camelus dromedarius;Transposable elements;de novo Assembly
DOI:
doi:10.5061/dryad.10h185k
摘要:
Transposable elements (TEs) along with simple sequence repeats (SSRs) are prevalent in eukaryotic genome, especially in mammals. Repetitive sequences
Data from: Patterns of transposable element variation and clinality in Drosophila
负责人:
关键词:
Local adapation;Cline;recombination;natural selection;admixture
DOI:
doi:10.5061/dryad.h1542kr
摘要:
h D. melanogaster and D. simulans live across a wide range of environments in North America. Here, we characterize patterns of variation in transposable elements (TEs
Data from: Genomics of parallel experimental evolution in Drosophila
负责人:
关键词:
parallel evolution;Experimental evolution;generation time;single nucleotide polymorphism;Transposable elements;drosophila melanogaster;structural variant;pooled population resequencing;linkage disequilibrium
DOI:
doi:10.5061/dryad.4nc28
摘要:
of single-nucleotide polymorphisms, transposable elements, insertions, and structural variants, which was expected. Entirely unexpected was a high degree of para
Data from: Structure and extent of DNA methylation-based epigenetic variation in wild emmer wheat (T. turgidum ssp. dicoccoides) populations
负责人:
关键词:
biodiversity;Triticum dicoccoides;DNA methylation;Triticum turgidum ssp. dicoccoides;T. turgidum ssp. dicoccoides;Emmer wheat;Transposable elements
DOI:
doi:10.5061/dryad.g31cv
摘要:
of Triticum turgidum ssp. dicoccoides. We used methylation sensitive amplified polymorphism (MSAP) and transposon methylation display (TMD) techniques, to assess
Data from: Differential effect of selection against LINE retrotransposons among vertebrates inferred from whole-genome data and demographic modeling
负责人:
关键词:
purifying selection;comparative population genomics;retrotransposons;Transposable elements;approximate Bayesian computation;composite likelihood optimization
DOI:
doi:10.5061/dryad.qd300cb
摘要:
ine stickleback, green anole, and house mouse, as well as three human populations. Specifically, we inferred a null demographic background utilizing SNP data, which
Data from: Linkage mapping with paralogs exposes regions of residual tetrasomic inheritance in chum salmon (Oncorhynchus keta)
负责人:
关键词:
tetrasomic inheritance;WGD;whole-genome duplication;Oncorhynchus keta;chum salmon;linkage mapping
DOI:
doi:10.5061/dryad.5b64r
摘要:
. Transposable elements have been proposed as drivers of genome evolution and, in salmonids, may have an important role in the rediploidization process by driving
Data from: De novo assembly of the transcriptome of an invasive snail and its multiple ecological applications
负责人:
关键词:
Genomics\/Proteomics;Molluscs;Transcriptomics;phylogeography;invasive species;Pomacea canaliculata
DOI:
doi:10.5061/dryad.8n776
摘要:
of the transcriptome resulted in 128,436 unigenes with an average length of 419 bp (range: 150 to 8,556 bp). Many of the unigenes (2,439) contained transposable element
Data from: Mitotic recombination and rapid genome evolution in the invasive forest pathogen Phytophthora ramorumm
负责人:
关键词:
Phytophthora ramorum
DOI:
doi:10.5061/dryad.d81073k
摘要:
(MR) associated with transposons and low gene density has generated runs of homozygosity (ROH) affecting 2698 genes, resulting in novel genotypic diversity
Data from: Hybrid dysgenesis in Drosophila simulans associated with a rapid invasion of the P-element
负责人:
关键词:
drosophila simulans;P-element;hybrid dysgenesis;Transposable elements
DOI:
doi:10.5061/dryad.1rq8f
摘要:
In a classic example of the invasion of a species by a selfish genetic element, the P-element was horizontally transferred from a distantly

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