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Data from: Evaluating summary methods for multi-locus species tree estimation in the presence of incomplete lineage sorting
负责人:
关键词:
supertree methods;incomplete lineage sorting;Concatenation;species tree estimation;MRL;MRP;multilocus bootstrapping;gene tree estimation error;MP-EST;gene tree discordance
DOI:
doi:10.5061/dryad.310q3
摘要:
rate gene trees. Our study suggests that coalescent-based species tree methods may be key to estimating highly accurate species trees from multiple loci.
Data from: Regular bottlenecks and restrictions to somatic fusion prevent the accumulation of mitochondrial defects in Neurospora
负责人:
关键词:
senescence;Mitochondria;kin selection;Neurospora crassa;levels of selection;anastomosis;multi-level selection;Neurospora intermedia
DOI:
doi:10.5061/dryad.5s67r
摘要:
The replication and segregation of the multi-copy mitochondrial DNA (mtDNA) are not under strict control of the nuclear DNA. Within-cell selection ma
Data from: Lake sediment multi-taxon DNA from North Greenland records early post-glacial appearance of vascular plants and accurately track
负责人:
关键词:
Metabarcoding;diatoms;copepods;Copepoda;vegetation history;Tracheophyta;Holocene;sedimentary DNA;bryophytes
DOI:
doi:10.5061/dryad.26h7b
摘要:
rrences of vascular plants, including the woody Empetrum nigrum, document terrestrial vegetation very shortly after glacial retreat. Our study shows that multi-taxon
) using a multi-locus approach
负责人:
关键词:
gene flow;Procellariiformes;Pelagodroma marina;anti-tropical divergence;anonymous nuclear markers;speciation;Pleistocene
DOI:
doi:10.5061/dryad.6nt0d
摘要:
Analytical methods that apply coalescent theory to multilocus data have improved inferences of demographic parameters that are criti
Data from: Which species, how many, and from where: Integrating habitat suitability, population genomics, and abundance estimates int
负责人:
关键词:
Cottus carolinae;translocation;Cottus bairdii;source stock prioritization;reintroduction planning;population genomics;Ecological restoration;species distribution modeling;Etheostoma blennioides
DOI:
doi:10.5061/dryad.sc1tm24
摘要:
ng species distribution modeling. Next, we evaluated the relative suitability of nine potential source stock sites using population genomics, abundance estimates, and multi
Data from: Species tree reconstruction of a poorly resolved clade of salamanders (Ambystomatidae) using multiple nuclear loci
负责人:
关键词:
Bayesian;Ambystoma;Gene tree;coalescent;Species tree
DOI:
doi:10.5061/dryad.2gq14
摘要:
ambystomatid phylogeny and which ones yield phylogenetically inaccurate reconstructions. To shed light on this conflict, we present the first multi-locus
Data from: Accounting for observation processes across multiple levels of uncertainty improves inference of species distributions and guides
负责人:
关键词:
detection;multi-scale occupancy;Environmental DNA;Monitoring;Sus scrofa;invasive species
DOI:
doi:10.5061/dryad.1fp259b
摘要:
in water bodies. We used a multi-scale occupancy analysis to estimate different levels of observation processes (detection, p): the probability DNA is available p
Data from: Genotyping of Coxiella burnetii from domestic ruminants and human in Hungary: indication of various genotypes
负责人:
关键词:
2010-2013;phylogenetic tree;multi-locus variable-number tandem repeat analysis;multispacer sequence typing;alignment;Coxiella burnetii
DOI:
doi:10.5061/dryad.rc8q4
摘要:
, n?=?5 and human, n?=?1) collected from across Hungary were studied by a 10-loci multispacer sequence typing (MST) and 6-loci multiple-locus variable-numb
Data from: Spatiotemporal patterns of duck nest density and predation risk: a multi-scale analysis of 18 years and more than 10 000 nests
负责人:
关键词:
waterfowl;predator;Anas platyrhynchos;Anas strepera
DOI:
doi:10.5061/dryad.m5r3n
摘要:
ken together, our results suggest that ducks may adaptively select nest sites based on the local density of conspecifics, rather than the physical locati
Data from: Local and system-wide adaptation is influenced by population connectivity
负责人:
关键词:
tipping point;Migration;Evolution;Systems biology;Adaptation;fragmentation
DOI:
doi:10.5061/dryad.2qg02qq
摘要:
orly connected systems are more prone to gradual node-by-node change. We use forward-in-time simulations of multi-locus evolution to test these general predicti

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