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Data from: NF-?B oscillations translate into functionally related patterns of gene expression
负责人:
关键词:
mouse embryo fibroblasts;Mus musculus;TNF-alpha;Pulsed stimulation;gene expression
DOI:
doi:10.5061/dryad.j62n1
摘要:
t transcription of NF-?B-controlled genes also oscillates, but mature transcript levels follow three distinct patterns. Two sets of transcripts accumulate fast
Data from: Cyclin dependent kinase 5 (CDK5) regulates the circadian clock
负责人:
关键词:
proteasome;Period2;nuclear localisation;Cryptochrome1;Mus musculus;phosphorylation
DOI:
doi:10.5061/dryad.4067r78
摘要:
Circadian oscillations emerge from transcriptional and post-translational feedback loops. An important step in generating rhythmicity
Data from: Hypothalamic transcriptomes of 99 mouse strains reveal trans eQTL hotspots, splicing QTLs and novel non-coding genes
负责人:
关键词:
Mus musculus;trans eQTL;mouse;RNA-seq;cis eQTL;eQTL;hypothalamus;local eQTL
DOI:
doi:10.5061/dryad.vm525
摘要:
valuable insight into the underlying molecular mechanisms. We used RNA-Seq to characterize hypothalamic transcriptome in 99 inbred strains of mice from
Data from: Transcriptome resources for the white-footed mouse (Peromyscus leucopus): new genomic tools for investigating ecologically divergent
负责人:
关键词:
Anthropocene;Natural Selection and Contemporary Evolution;Transcriptomics;Mammals;Empirical Population Genetics;Contemporary Evolution;Ecological Genetics;Peromyscus leucopus
DOI:
doi:10.5061/dryad.6hc0f
摘要:
e annotated from comparisons to Mus musculus (39.96% annotated) Uniprot databases. We identified 104,655 high quality single nucleotide polymorphisms (SNPs)
Data from: Sexual selection constrains the body mass of male but not female mice
负责人:
关键词:
Mus musculus;intrasexual selection;Mammals;sexual selection;sexual size dimorphism;stabilizing selection
DOI:
doi:10.5061/dryad.v3p2g
摘要:
this hypothesis by retrospectively assessing the influence of body mass, one metric of body size, on the fitness of 113 wild-derived house mice (Mus musculus
Data from: Experimental manipulation of population-level MHC diversity controls pathogen virulence evolution in Mus musculus
负责人:
关键词:
Major histocompatibility complex;Mus musculus;Virulence;trade-offs;Evolution;Experimental evolution;Ecology;virology
DOI:
doi:10.5061/dryad.3h0q8
摘要:
The virulence levels attained by serial passage of pathogens through similar host genotypes are much higher than observed in natural systems, however, it is unknown what keeps natural virulence levels below these empirically demonstrated maximum levels. One hypothesis suggests that host diversity impedes pathogen virulence, because adaptation to one host genotype carries tradeoffs in the ability to replicate and cause disease in other host genotypes. To test this hypothesis, with the simplest level of population diversity within the loci of the major histocompatibility complex (MHC), we serially passaged Friend Virus Complex (FVC) through two rounds, in hosts with either the same MHC genotypes (pure passage) or hosts with different MHC genotypes (alternated passage). Alternated passages showed a significant overall reduction of viral titer (31%) and virulence (54%) when compared to pure passages. Furthermore, a resistant host genotype initially dominated any effects due to MHC diversity, however, when FVC was allowed to adapt to the resistant host genotype, predicted MHC effects emerged, i.e. alternated lines show reduced virulence. These data indicate serial exposure to diverse MHC genotypes is an impediment to pathogen adaptation, suggesting genetic variation at MHC loci is important for limiting virulence in a rapidly evolving pathogen and supports negative frequency-dependent selection as a force maintaining MHC diversity in host populations.
Data from: TAF4, a subunit of transcription factor II D, directs promoter occupancy of nuclear receptor HNF4A during post-natal
负责人:
关键词:
enhancer;Mus musculus;TBP;imprinting;Liver;RNA polymerase II pausing;TAF3
DOI:
doi:10.5061/dryad.62gj0
摘要:
of TAFs in directing genomic occupancy of a transcriptional activator. Using liver-specific inactivation in mice, we show that the TAF4 subunit of TFIID
Data from: Effects of a titin mutation on force enhancement and force depression in mouse soleus muscles
负责人:
关键词:
force depression;titin;force enhancement;Mus musculus;muscular dystrophy with myositis;skeletal muscle
DOI:
doi:10.5061/dryad.3vm2818
摘要:
er isovelocity stretching and shortening at three activation levels. Muscles from mdm mice (muscular dystrophy with myositis) have a predicted 83 amino acid
Data from: Rates of evolution: a quantitative synthesis
负责人:
关键词:
Brachycrus wilsoni;Mesozoic;Otomys auretus;Experimental Selection;Paleocene;Longitudinal time series;Merycochoerus proprius;Ectocion parvus;Passer montanus;Petrochelidon pyrrhonota;Metrarabdotos volkesorum;Metrarabdotos cubaguaense;Anolis carolinensis;Anakosmoceras sp.;Globoratalia tumida;Oligocene;Cervus elaphus;Rattus rattus;Ursavus elmensis;Merychippus paniensis;Longitudinal field study;cross-sectional field study;Merychyus elegans;Mesohippus bairdi;Hyracotherium sandrae;Hyopsodus latidens;Cantius trigonodus;Cantius ralstoni;Kosmoceras sp.;Passer domesticus;Pliocene;Merycochoerus matthewi;Stephanodiscus yellowstonensis;Eocoelia sp.;Hyopsodus pauxillus;Jurassic;Merychyus crabilli;Neotoma albigula;Branta leucopsis;Scathophaga stercoraria;Mus sp.;Metrarabdotos colligatum;Peromyscus maniculatus;Loxodonta sp.;Mollusca;Holocene;Mesomyla sclateri;Homo erectus;Brassica rapa;Mammuthus sp.;Artificial selection;Haplomylus simpsoni;Cormohipparion occidentale;Peromyscus leucopus;Cosomys primus;Hyracotherium grangeri;Parapelomys sp.;Globorotalia conoidea;Eohippus resartus;Vulpes vulpes;Hyopsodus miticulus;Zea mays;Dipodomys merriami;Urocitellus beldingi;Amara quenseli;Eocene;Herpestes auropunctatus;Otomys angoniensis;Hyopsodus powellianus;Hirundo rustica;Elephas sp.;Poseidonamicus spp.;Paleozoic;Primelephas sp.;Euryderus grossus;Globoratalia plesiotumida;Merychyus relictus;Ursus etruscus;Cantius mckennai;Gyretes sinuatus;Gambusia affinis;Globorotalia inflata;Gasterosteus aculeatus;Pleistocene;Drepanis coccinea;Gymnodactylus amarali;Carabus nemoralis;Chlorocebus sabaeus;Experimental field study;Ursus spelaeus;Myzomela pammelaena;Cymindis planipennis;Thymallus thymallus;Ectocion ralstonensis;Haplomylus speirianus;Pseudocubus vema;Pterostichus algidus;Dinosauria;Pterostichus melanarius;Equus germanicus;Cenozoic;Globorotalia puncticulata;Gallus gallus;Merychyus minimus;Cryptopecten vesicululosus;Equidae;Hyopsodus minor;Hyracotherium borealis;Oncorhyncus nerka;Ovis aries;Fringilla coelebs;fossil record;Anser caerulescens;Haplomylus scottianus;drosophila melanogaster;Brachycrus siouense;Cantius torresi;Hyopsodus lysitensis;Ficedula albicollis;Ectocion osbornianus;Mus musculus;Silurian;Bison bison;Metrarabdotos saundersi;Zugokosmoceras sp.;Bison priscus;Metrarabdotos auriculatum;Bison latifrons;Mandarina chichijimana;Gasterosteus doryssus;Geospiza scandens;Scaphinotus angusticollis;Telespyza canans;Recent;Oryctolagus cuniculus;Jadera haematoloma;Antemus sp.;Hyopsodus loomisi;Progonomys sp.;Drosophila subobscura;Harpalus fraternus;introduced species;Laboratory selection;Haplomylus palustris;Haplomylus zalmouti;Cyclostephanos andinus;Loxodonta africana;Globorotalia conomiozea;Karnimata sp.;Plethodon spp.;natural selection;Geospiza fortis;Ursus arctos;Bison antiquus;Metrarabdotos boldi;Metrarabdotos coatesi;Drosophila pseudoobscura;Littorina obtusata;Parus caeruleus;Poecilia reticulata;Miocene
DOI:
doi:10.5061/dryad.1tn7123
摘要:
One-generation step intervals, differences, and rates; longer base intervals, differences, and rates; and overlapping net intervals, differences, and rates for selection experiments (file 1: 15,431 rates), field studies (file 2: 12,461 rates), and fossil studies (file 3: 47,854 rates).
Data from: Cyfip1 regulates presynaptic activity during development
负责人:
关键词:
WAVE1;15q11.2;F-actin;Rattus norvegicus;Cyfip1;Mus musculus;Sra1;WRC;synapse
DOI:
doi:10.5061/dryad.nt60p
摘要:
by dysregulation of the WAVE regulatory complex. Such dysregulation occurs downstream of Rac1 as acute exposure to Rac1 inhibitors rescues presynaptic responses

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