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Data from: Islands of retroelements are major components of Drosophila centromeres
负责人:
关键词:
drosophila simulans;centromere;Long read sequencing;Drosophila;ChIP-seq;Retroelement;drosophila melanogaster
DOI:
doi:10.5061/dryad.rb1bt3j
摘要:
hough significant progress has been made in identifying centromere-associated proteins, the highly repetitive centromeres of metazoans have
Data from: Analysis of transposable elements in the genome of Asparagus officinalis from high coverage sequence data
负责人:
关键词:
DOI:
doi:10.5061/dryad.s71t4
摘要:
is consistent with the relatively recent origin of asparagus sex chromosomes. This study greatly improves our knowledge of the repetitive sequence constructi
Data from: Using transcriptome sequencing and pooled exome capture to study local adaptation in the giga-genome of Pinus cembra
负责人:
关键词:
Genomics\/Proteomics;Transcriptomics;Pinus cembra;Landscape Genetics;Ecological Genetics;Adaptation;Population Genetics - Empirical;Pinus sibirica
DOI:
doi:10.5061/dryad.4bb5849
摘要:
for organisms with large genomes. Moreover, the repetitive nature of large genomes often represents a challenge in bioinformatic and downstream analyses. Her
Data from: Optimization of the genotyping-by-sequencing strategy for population genomic analysis in conifers
负责人:
关键词:
genotyping-by-sequencing;sequencing depth;SNP validation;library prep parameters;conifer genome;Pinus
DOI:
doi:10.5061/dryad.39gc6
摘要:
cially for conifer genomes with a high repetitive DNA content. In this study, we explored strategies for effective GBS analysis in pine species. We constructed GBS
Data from: Selection, periodicity and potential function for highly iterative Palindrome-1 (HIP1) in cyanobacterial genomes
负责人:
关键词:
repetitive element;selection;chromosome architecture;Cyanobacteria;periodicity;Synechococcus elongatus PCC 7942;supercoiling
DOI:
doi:10.5061/dryad.b301d
摘要:
one motif per gene. Such high abundance suggests a significant role in cyanobacterial biology. However, 20 years of study have not revealed whether
Data from: Anolis sex chromosomes are derived from a single ancestral pair
负责人:
关键词:
homology;X chromosome;phylogenetics;Anolis;reptile;cytogenetics;sex determination
DOI:
doi:10.5061/dryad.dp848
摘要:
mes in the genus. Fluorescent in situ hybridization (FISH) of repetitive DNA showed variable rates of Y chromosome degeneration among Anolis species and identi
Data from: Dealing with paralogy in RADseq data: in silico detection and single nucleotide polymorphism validation in Robinia pseudoacacia L.
负责人:
关键词:
repetitive region filtering;restriction site-associated DNA sequencing;depth of coverage;black locust;Robinia pseudoacacia
DOI:
doi:10.5061/dryad.qn4br
摘要:
loci on genetic diversity estimation during the development of SNPs from a RADseq dataset for the nonmodel tree species Robinia pseudoacacia L.
Data from: Evolution and conservation of Characidium sex chromosomes
负责人:
关键词:
DOI:
doi:10.5061/dryad.tr3d8
摘要:
ng a rapid turnover of W-specific repetitive elements. Together, our analyses point to a complex origin for the sex chromosome of C. gomesi and highlight
Data from: Rapid microsatellite isolation from a butterfly by de novo transcriptome sequencing: performance and a comparison with AFLP-derive
负责人:
关键词:
Euphydryas editha;454;SSR;Next-generation sequencing;EST;variable number sequence repeats;simple sequence repeats;VNTR
DOI:
doi:10.5061/dryad.1540
摘要:
lopment of microsatellite markers has been particularly difficult, as many markers appear to be located in repetitive DNA and have nearly identical flanking regions. We attempted

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