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Data from: Probabilistic graphical model representation in phylogenetics
负责人:
关键词:
tree plate;Inference;Statistical phylogenetics;Graphical Models;modularization;computation
DOI:
doi:10.5061/dryad.nt898
摘要:
graphical model representation to the realm of phylogenetics. We introduce a new graphical model component, tree plates, to capture the changing structure
Data from: Spatial phylogenetics reveals evolutionary constraints on the assembly of a large regional flora
负责人:
关键词:
niche modeling;phylogenetic diversity;community assembly;phylogenetic niche conservatism;Wisconsin;climate change
DOI:
doi:10.5061/dryad.kf6q10b
摘要:
rily by phylogenetic niche conservatism. Closely related species are ecologically similar and occupy similar territories. The average level and geographic structure of plant
Data from: Logging increases the functional and phylogenetic dispersion of understorey plant communities in tropical lowland rainforest
负责人:
关键词:
Determinants of plant community diversity and structure;response diversity;logging intensity;Land-use change;Dipterocarp forest;plant functional traits;Above-ground biomass;disturbance gradient;phylogenetic signal
DOI:
doi:10.5061/dryad.f77p7
摘要:
onal and phylogenetic structures within communities as logging intensity increases. 2. We surveyed understorey plant communities at 180 locations across a logging intensity
Data from: Graph splitting: a graph-based approach for superfamily-scale phylogenetic tree reconstruction
负责人:
关键词:
early evolution;TIM-barrel superfamily;Network analysis;Phylogenetic method;bioinformatics
DOI:
doi:10.5061/dryad.ps0qf4r
摘要:
s a protein superfamily-scale phylogenetic tree using a graph-based approach. Evolutionary simulation showed that the GS method can accurately reconstruct
Data from: Molecular phylogenetics of desmognathine salamanders (Caudata: Plethodontidae): a reevaluation of evolution in ecology, life history
负责人:
关键词:
Ecology;salamanders;Mitochondrial DNA;ribosomal DNA;Desmognathinae;Life history;molecular phylogenetics
DOI:
doi:10.5061/dryad.763
摘要:
Phylogenetic relationships were reconstructed for salamanders of the plethodontid subfamily Desmognathinae to examine evolution of morphology
Data from: Determining population structure and hybridization for two iris species
负责人:
关键词:
genotyping-by-sequencing;population genetics;Iris brevicaulis;Iris fulva;introgression
DOI:
doi:10.5061/dryad.sd845
摘要:
was reflected in the phylogeny. The I. fulva phylogeny reflected much less structure than detected for I. brevicaulis. Lastly, combining both species int
Data from: Phylogenetic comparative methods for evaluating the evolutionary history of function-valued traits
负责人:
关键词:
Function-Valued Traits;phylogenetic comparative method;evolution of tolerance;Phenotypic Plasticity;infinite-dimensional traits;PGLS;ancestral state reconstruction;reaction norms;dose-response curves;phylogenetic signal
DOI:
doi:10.5061/dryad.5nd50
摘要:
in a phylogenetic generalized least squares (PGLS) framework, as well as extensions of this method for testing phylogenetic signal, performing phylogenetic analysis
Data from: Evolutionary history shapes patterns of mutualistic benefit in Acacia-rhizobial interactions
负责人:
关键词:
specialist;symbiosis;generalist;Acacia;Interaction;phylogeny;Rhizobium;nitrogen fixation;Mesorhizobium;Bradyrhizobium
DOI:
doi:10.5061/dryad.n5328
摘要:
rhizobial bacteria. Using phylogenetic comparative methods we compared patterns of variation in mutualistic benefit to rhizobial phylogenies constructed from
Data from: Agriculturally dominated landscapes reduce bee phylogenetic diversity and pollination services
负责人:
Grab, Heather
关键词:
DOI:
doi:10.5061/dryad.3df2q0k
摘要:
relationships among land use, pollinator phylogenetic structure, and crop production. Pollinator communities in highly agricultural landscapes contain 230 milli
Data from: Global lack of flyway structure in a cosmopolitan bird revealed by a genome wide survey of single nucleotide polymorphisms
负责人:
关键词:
phylogeography;Birds;Bioinfomatics\/Phyloinfomatics;Anas platyrhynchos;Wildlife Management;Population Genetics - Empirical;Adaptation
DOI:
doi:10.5061/dryad.1bq39
摘要:
populations. We employed 363 single nucleotide polymorphism (SNP) markers in combination with population genetics and phylogeographic approaches to conduct

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