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Data from: Inferring the history of interchromosomal gene transposition in Drosophila using n-Dimensional parsimony
负责人:
关键词:
Drosophila
DOI:
doi:10.5061/dryad.sn5r5
摘要:
ble with the availability of whole genomes from multiple species. Here we used parsimonious reconstruction on the genomic distribution of gene families to analyze
Data from: Parsimonious inference of hybridization in the presence of incomplete lineage sorting
负责人:
Nakhleh, Luay
关键词:
phylogenetic networks gene trees hybridization incomplete lineage sorting coalescent multi-labeled trees
DOI:
doi:10.5061/dryad.sr534
摘要:
a parsimony criterion for reconciling gene trees within the branches of a phylogenetic network, and a local search heuristic for inferring phylogenetic networks
Data from: Homoplasy-based partitioning outperforms alternatives in Bayesian analysis of discrete morphological data
负责人:
关键词:
stepping-stone;TNT;MrBayes;implied weighting parsimony;Aves;fossil;Hymenoptera;Homoplasy
DOI:
doi:10.5061/dryad.1hh515h
摘要:
ined from implied weighting parsimony analysis) outperformed other partitioning strategies (anatomically-based and PartitionFinder2). The method
Data from: A genome-wide phylogeny of jumping spiders (Araneae, Salticidae), using anchored hybrid enrichment
负责人:
关键词:
salticids;Jumping spiders;Dionycha;systematics;phylogenomics
DOI:
doi:10.5061/dryad.n2b3h
摘要:
totalling 96,946 aligned nucleotide sites. Our analyses using concatenated likelihood, parsimony, and coalescent methods (ASTRAL and SVDQuartets) strongl
Data from: Step matrices and the interpretation of homoplasy
负责人:
关键词:
phylogenetic inference;parsimony;character evolution;ancestral states;Homoplasy
DOI:
doi:10.5061/dryad.119
摘要:
Assumptions about the costs of character change, coded in the form of a step matrix, determine most-parsimonious inferences of char
Data from: Who let the CAT out of the bag? accurately dealing with substitutional heterogeneity in phylogenomic analyses
负责人:
关键词:
site-heterogeneity;Simulation;data partitioning;substitution models;phylogenomics
DOI:
doi:10.5061/dryad.85b2m
摘要:
ving constant sites and parsimony uninformative characters, or using CAT-F81 when CAT-GTR is deemed too computationally expensive, cannot be logically justified
Data from: Unraveling the evolutionary radiation of the families of the Zingiberales using morphological and molecular evidence
负责人:
关键词:
tropical;Zingiberales;morphology;atpB;fossils;phylogeny;rbcL;18S;monocots
DOI:
doi:10.5061/dryad.705
摘要:
ng the currently recognized eight families are investigated here using parsimony and maximum likelihood analyses of four char
Data from: Population genetics of four heavily exploited shark species around the Arabian Peninsula
负责人:
关键词:
elasmobranchs;Rhizoprionodon acutus;connectivity;Sphyrna lewini;Holocene;Carcharhinus limbatus;Carcharhinus sorrah;Pleistocene
DOI:
doi:10.5061/dryad.4gk47
摘要:
statistical parsimony networks among haplotypes and estimated (1) population structure; and (2) time of most recent population expansion, based
Data from: A partitioned likelihood analysis of swallowtail butterfly phylogeny (Lepidoptera: Papilionidae)
负责人:
关键词:
process partitions;Likelihood;data partitioning;Heterogeneity
DOI:
doi:10.5061/dryad.615
摘要:
. Parsimony encountered considerable difficulty in resolving the deepest splits among these taxa. We therefore chose two outgroups whose relationships to ea
Data from: Biogeographic regions of North American mammals based on endemism
负责人:
关键词:
provinces;Species distribution models;Parsimony Analysis of Endemicity;Mammalia;Neotropical;Endemicity Analysis;Regions;present;Mexican Transition Zone;Nearctic
DOI:
doi:10.5061/dryad.18j3d
摘要:
) and Parsimony Analysis of Endemicity (PAE). EA was used to obtain areas of endemism and PAE to hierarchize them. We found 76 consensus areas from 329 sets, classified in 146 cladograms

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