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Data from: When are phylogenetic analyses misled by convergence? A case study in Texas cave salamanders
- 负责人：
- 关键词：
- salamanders;morphology;convergence;Adaptation;phylogeny;Eurycea;molecular systematics;Homoplasy
- DOI：
- doi:10.5061/dryad.845
- 摘要：
- or not a phylogenetic analysis has been misled by convergence. We then apply these criteria in a study of central Texas cave salamanders (genus Eurycea). Morpholog
Data from: Lineage-specific mapping of quantitative trait loci
- 负责人：
- 关键词：
- DOI：
- doi:10.5061/dryad.23r11
- 摘要：
- ween pairs of taxa, such inferences can be made along lineages to a presumed common ancestor. While comparisons of QTL maps among species can identify homology
Data from: Exon capture phylogenomics: efficacy across scales of divergence
- 负责人：
- DOI：
- doi:10.5061/dryad.34274
- 摘要：
- st recruiting short sequencing reads having homology to the corresponding protein sequence. In sum, custom exon capture provides a complement to existing, mo
Data from: Testing for homologies in the axial skeleton of primitive echinoderms
- 负责人：
- DOI：
- doi:10.5061/dryad.n2d7d
- 摘要：
- The extraxial axial theory is used to investigate homology of ambulacral and oral plating because it predicts terminal branching and terminal
Data from: Large-scale genotyping of highly polymorphic loci by next generation sequencing: how to overcome the challenges to reliably genotype individuals?
- 负责人：
- DOI：
- doi:10.5061/dryad.rp7n9
- 摘要：
- belonging to MHC class I and II of Alpine marmots (Marmota marmota). Our post-processing methodology allowed us to increase the number of retained reads
Data from: Molecular and morphological phylogenetic analysis of an insular radiation in Pacific black flies (Simulium)
- 负责人：
- DOI：
- doi:10.5061/dryad.618
- 摘要：
- larval feeding fans (oviceps group). The Partitiona Homogeneity and Kashino-Hasegawa tests indicated significant incongruence between morpholog
Data from: Neighborhood defense gene similarity effects on tree performance: a community transcriptomic approach
- 负责人：
- DOI：
- doi:10.5061/dryad.q3j60
- 摘要：
- ible in natural systems where de novo transciptome assemblies can be used to conduct functional phylogenomic analyses where homologous gene trees are produced. Usi
Data from: Phylogenomic systematics of Ostariophysan fishes: ultraconserved elements support the surprising non-monophyly of Characiformes
- 负责人：
- DOI：
- doi:10.5061/dryad.n9g60
- 摘要：
- elusive, with previous molecular and morphological analyses failing to produce a consensus phylogeny. In this study, we use over 350 ultraconserved element
Data from: Genome skimming by shotgun sequencing helps resolve the phylogeny of a pantropical tree family
- 负责人：
- DOI：
- doi:10.5061/dryad.78p90
- 摘要：
- to classical molecular phylogenetic approaches. As a case study, we performed a shallow shotgun sequencing of eight species in the tropical tree family
Data from: Phylogenomic analysis of BAC-end sequence libraries in Oryza (Poaceae)
- 负责人：
- Cranston, Karen A.
- DOI：
- doi:10.5061/dryad.1611
- 摘要：
- phylogenetic studies, although the non-phylogenetic signal and high levels of missing data must be handled carefully. Phylogenetic analysis of 12 chromo
