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Data from: Genome-wide variation in nucleotides and retrotransposons in alpine populations of Arabis alpina (Brassicaceae)
负责人:
关键词:
Arabis alpina<\/i>;Single-nucleotide polymorphisms;linkage disequilibrium;whole-genome re-sequencing;Arabis alpina;Transposable elements;Genome-wide diversity
DOI:
doi:10.5061/dryad.58g217k
摘要:
Advances in high-throughput sequencing have promoted the collection of reference genomes and genome-wide diversity. However, the assessment
Data from: Targeted re-sequencing of coding DNA sequences for SNP discovery in non-model species
负责人:
关键词:
conservation genetics;genetic monitoring;CDS;Eurasian lynx;Lynx lynx;single-nucleotide polymorphism;hybridization capture
DOI:
doi:10.5061/dryad.3f4jr01
摘要:
in L. lynx across the species’ European range. A large set of bi-allelic candidate SNPs was then evaluated using a high throughput SNP-genotyping platform
Data from: Use of genotyping-by-sequencing data to develop a high-throughput and multi-functional SNP panel for conservation applications in Pacific
负责人:
关键词:
Conservation Genetics Empirical Population Genetics Life History Evolution Animal Mating/Breeding Systems Ecological Genetics Fisheries Management
DOI:
doi:10.5061/dryad.qk60s
摘要:
Next generation sequencing data can be mined for highly informative single nucleotide polymorphisms (SNPs) to develop high-throughput genomic assays
Data from: CHIIMP: an automated high-throughput microsatellite genotyping approach reveals greater allelic diversity in wild chimpanzees
负责人:
关键词:
microsatellites;chimpanzees;Pan troglodytes
DOI:
doi:10.5061/dryad.59j3974
摘要:
ater Mahale Ecosystem in Tanzania, demonstrating the utility of the MiSeq-based approach for genotyping non-habituated populations and performing
Data from: Genetic evaluation of migratory fish: implications for conservation and stocking programs
负责人:
关键词:
Fish;conservation;Stocking
DOI:
doi:10.5061/dryad.tqjq2bvtq
摘要:
Prochilodus costatus in the Três Marias dam in S?o Francisco River basin, Brazil, using high-throughput genotyping and population genetics approaches. In total
Data from: Attack of the PCR clones: rates of clonality have little effect on RAD-seq genotype calls
负责人:
关键词:
conservation genetics;Salvelinus fontinalis;methodology;genotyping;Sander vitreus;Fish;PCR duplicates;Oncorhynchus keta;Coregonus artedi;Population Genetics - Empirical
DOI:
doi:10.5061/dryad.3mq4631
摘要:
Interpretation of high-throughput sequence data requires an understanding of how decisions made during bioinformatic data processing can influence
Data from: Family-assisted inference of the genetic architecture of MHC variation
负责人:
关键词:
gene duplication;copy number variation (CNV);Birds;immunogenetics;Major histocompatibility complex;adaptive genetic diversity
DOI:
doi:10.5061/dryad.rm611
摘要:
nes remain a major challenge. While high-throughput sequencing technologies now provide unprecedented resolution of the high allelic diversity observed
Data from: Degenerate adaptor sequences for detecting PCR duplicates in reduced representation sequencing data improve genotype calling accuracy
负责人:
关键词:
Wasmannia auropunctata;Mixornis gularis;Next-generation sequencing;genotyping;Saccharomyces cervisiae;RAD-seq;methodology
DOI:
doi:10.5061/dryad.34dt1
摘要:
RAD-tag is a powerful tool for high-throughput genotyping. It relies on PCR amplification of the starting material, following enzymatic dige
Data from: Accounting for genotype uncertainty in the estimation of allele frequencies in autopolyploids
负责人:
关键词:
hierarchical Bayesian modeling;genotyping by sequencing;polyploidy;population genomics;RADseq;allelic dosage uncertainty
DOI:
doi:10.5061/dryad.t297p
摘要:
Despite the increasing opportunity to collect large-scale data sets for population genomic analyses, the use of high-throughput sequencing to study

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