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Data from: Whole genome resequencing reveals extensive natural variation in the model green alga Chlamydomonas reinhardtii
负责人:
关键词:
gene deletions;laboratory evolution;loss-of-function;single nucleotide polymorphism (SNP);presence\/absence variation;Chlamydomonas reinhardtii;population genomics;nonsense mutations;gene gains
DOI:
doi:10.5061/dryad.1n0g6
摘要:
cellular functions, while genes in large gene families and poorly characterized genes show a greater incidence of major effect mutations. De novo assembly of unmapped
Data from: Deep sequencing of mixed total DNA without barcodes allows efficient assembly of highly plastic ascidian mitochondrial genomes
负责人:
Huchon, Dorothée
关键词:
Phylogeny Mitochondrial genome Mitogenomics Next-generation sequencing Illumina Gene order Rearrangements Mixture models Genome assembly.
DOI:
doi:10.5061/dryad.ph920
摘要:
r mitochondrial genomes are characterized by particularly high evolutionary rates and rampant gene rearrangements. This extreme variability complicates standard PCR-based
Data from: De novo assembly and comparative analysis of the Ceratodon purpureus transcriptome
负责人:
关键词:
systematics;Transcriptomics;molecular evolution;Plant Mating Systems;Development and Evolution;Population Genetics - Empirical
DOI:
doi:10.5061/dryad.5fm82
摘要:
ween C. purpureus and P. patens provides new insights into the evolution of gene family composition across the land plants. In spite of the overall transcriptomic
Data from: The evolutionary conservation of the A Disintegrin-like and Metalloproteinase domain with Thrombospondin-1 motif metzincins ac
负责人:
关键词:
Whole Genome Duplications;development;Vertebrata;ADAMTS;Evolution;Zebrafish;gene expression;Metazoa
DOI:
doi:10.5061/dryad.57sg5
摘要:
ults: Using bioinformatics complemented with de novo sequencing, gene sequences for ADAMTS enzymes were obtained from a variety of organisms. Detailed
Data from: Whole plastome sequencing reveals deep plastid divergence and cytonuclear discordance between closely related balsam poplars
负责人:
关键词:
Natural Selection and Contemporary Evolution Molecular Evolution Speciation Genomics/Proteomics
DOI:
doi:10.5061/dryad.nj5h5
摘要:
a combination of de novo assembly and reference-based mapping using short-read shotgun sequences to construct a robust phylogeny of the plastome for multi
Data from: Evaluation of the impact of RNA preservation methods of spiders for de novo transcriptome assembly
负责人:
关键词:
Genomics\/Proteomics;Parasteatoda tepidariorum;molecular evolution;Bioinfomatics\/Phyloinfomatics;Invertebrates;spider
DOI:
doi:10.5061/dryad.r94k7
摘要:
. To this end, we report a streamlined feasibility study of various storage conditions and their effects on de novo transcriptome assembly results. The storage parameters
Data from: Optimisation of next generation sequencing transcriptome annotation for species lacking sequenced genomes
负责人:
关键词:
Genomics\/Proteomics;Transcriptomics;molecular evolution;Bioinfomatics\/Phyloinfomatics
DOI:
doi:10.5061/dryad.2v3h4
摘要:
Next generation sequencing methods, such as RNA-seq, have permitted the exploration of gene expression in a range of organisms which hav
Data from: Characterization of the transcriptome and gene expression of four different tissues in the ecologically relevant sea urchin Arbacia lixula
负责人:
关键词:
Transcriptomics;Arbacia lixula;Echinoderms;de novo Assembly;Invertebrates
DOI:
doi:10.5061/dryad.2rs4k
摘要:
on of target genes in each tissue because of their relevance for further studies on evolution and adaptation of echinoids.
Data from: Comparative genomics of Methicillin-resistant Staphylococcus aureus ST239: distinct geographical variants in Beijing and Hong Kong
负责人:
关键词:
WGS;phylogenetic tree;SNP;MRSA;Staphylococcus aureus
DOI:
doi:10.5061/dryad.12773
摘要:
inly in southern Asia, whereas those that emerged in northern China were of a distinct origin, reflecting the complexity of dissemination and the dynamic evolution

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