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Data from: Probabilistic methods surpass parsimony when assessing clade support in phylogenetic analyses of discrete morphological data
负责人:
关键词:
phylogenetic analysis;morphology;Mk Model;parsimony;Bayesian;maximum likelihood
DOI:
doi:10.5061/dryad.8dd39
摘要:
phylogenetic methods in terms of clade support. We characterize clade support using bootstrapping for parsimony and Maximum Likelihood, and intrinsic Bayesian
Data from: Accurate inference of tree topologies from multiple sequence alignments using deep learning
负责人:
关键词:
Supervised Machine Learning;convolutional neuronal network;phylogenetics
DOI:
doi:10.5061/dryad.ct2895s
摘要:
e accurately assess support for the chosen topology than bootstrap and posterior probability scores from traditional methods. While numerous practical challenges
Data from: Dealing with uncertainty in landscape genetic resistance models: a case of three co-occurring marsupials
负责人:
关键词:
conservation;Antechinus;Antechinus flavipes;Simulation;Landscape Genetics;Petaurus norfolcensis;uncertainty;landscape resistance optimisation;Holocene;Petaurus breviceps;Petaurus
DOI:
doi:10.5061/dryad.7cs0p
摘要:
uncertainty in resistance estimates by examining parameter selection probabilities from the bootstrapped data. The selection probabilities provide estimates
stralian Enigma"" data-category="" data-cropid="" data-dimen="" data-id="b34e587f-f979-11ea-ae96-0242ac110002"> Data from: Australian Lasioglossum + Homalictus Form a Monophyletic Group: Resolving the "Australian Enigma"
负责人:
关键词:
Biogeography;elongation factor-1?;maximum likelihood;phylogeny;Social evolution
DOI:
doi:10.5061/dryad.637
摘要:
t the primarily Indoaustralian subgenera (Homalictus, Chilalictus, Parasphecodes) form a monophyletic group. Bootstrap support for the Australian clade ra
Data from: Using novel phylogenetic methods to evaluate mammalian mtDNA, including amino acid-invariant sites-LogDet plus site stripping, to detect
负责人:
关键词:
amino acid composition;statistical tests;LogDeterminant;tRNA;invariant sites;mammal phylogeny;mitochondrial DNA genomes
DOI:
doi:10.5061/dryad.401
摘要:
the data using "site stripping". This leads to changing optimal trees with nearly all methods. The bootstrap support for many hypotheses varies widely bet
Data from: Latitude drives diversification in Madagascar’s endemic dry forest rodent, Eliurus myoxinus (sub-family Nesomyinae)
负责人:
关键词:
watersheds;diversification;endemism;Eliurus myoxinus;Nesomyinae;phylogeography
DOI:
doi:10.5061/dryad.5gs1v
摘要:
hormone receptor genes for E. myoxinus. Using a parametric bootstrapping approach, we tested whether the mitochondrial gene tree data fit expectations of local differentiation give
Data from: Generic and subtribal relationships in Neotropical Cymbidieae (Orchidaceae) based on matK/ycf1 plastid data
负责人:
关键词:
Camaridium;Orchidaceae;Cymbidieae;matK;Vargasiella;phylogenetics;Maxillariinae;Maxillaria cacaoensis;ycf1
DOI:
doi:10.5061/dryad.2rm60
摘要:
. The matrix was analyzed using RAxML. Bootstrap (BS) analyses yield 100% BS support for all subtribes except Stanhopeinae (87%). Generic relationships
Data from: Phylogenetic relationships of Agaric fungi based on nuclear large subunit ribosomal DNA sequences
负责人:
关键词:
higher phylogeny;large scale molecular phylogeny;tree support;fungal evolution
DOI:
doi:10.5061/dryad.561
摘要:
estimates of Agaricales phylogeny. Similar support was observed between bootstrapping and jackknifing methods for evaluation of tree robustness
Data from: Phylogenetic relationships and tempo of early diversification in Anolis lizards
负责人:
关键词:
polytomy;Mitochondrial DNA;permutation test;Parametric bootstrap;phylogeny;Anolis
DOI:
doi:10.5061/dryad.412
摘要:
morphological characters for phylogenetic analysis. Our analyses yielded poorly-supported nodes deep in the anole tree but many well-supported nodes for more recent

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