SLAFEEL: R scripts and reformatted data analyzed by Alamil et al. (2019)

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infectious disease pathogen spread transmission trees within-host pathogen diversity Ebola swine influenza wild salsify potyvirus

DOI：

doi:10.5281/zenodo.1410438

摘要：

matrices.Murcia PR, Hughes J, Battista P, Lloyd L, Baillie GJ, Ramirez-Gonzalez RH, et al. Evolution of an Eurasian avian-like influenza virus in naive

Data from: Intercontinental genetic structure and gene flow in Dunlin (Calidris alpina), a potential vector of avian influenza

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microsatellites;Calidris alpina;mtDNA

DOI：

doi:10.5061/dryad.4t806

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Waterfowl (Anseriformes) and shorebirds (Charadriiformes) are the most common wild vectors of influenza A viruses. Due to their migratory behavi

Data from: Challenging the conceptual framework of maintenance hosts for influenza A viruses in wild birds

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Avian Influenza;maintenance host;Charadriiformes;Anseriformes;maintenance community;disease ecology;Holocene;wild bird

DOI：

doi:10.5061/dryad.58g12

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1.The conceptual framework considering Anseriformes and Charadriiformes as the main maintenance hosts for influenza A viruses (IAV) in wild birds ha

Data from: Transfer of maternal antibodies against avian influenza virus in mallards (Anas platyrhynchos)

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antibody;egg;maternity;avian influenza virus;Anas platyrhynchos;quantitative ELISA;yolk;mallard;AIV

DOI：

doi:10.5061/dryad.43v0t

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of the proportion of susceptible individuals in a population. We investigated the transfer of maternal antibodies against avian influenza virus (AIV) in a key AIV

Data from: Subtype diversity and reassortment potential for co-circulating avian influenza viruses at a diversity hot spot

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biological diversity host-pathogen evolution prevalence Simpson's Index

DOI：

doi:10.5061/dryad.nm70b

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ted low-pathogenicity avian influenza (LPAI) viruses. These viruses are important as a potential source of genetic innovations in influenza. A theoretical

nt vector of highly pathogenic avian influenza viruses

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Aythya ferina;Migration;population genetics;2006-2010

DOI：

doi:10.5061/dryad.vt642

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l vector of highly pathogenic avian influenza. We collected several hundred samples from breeding and wintering grounds across Eurasia including some H5N1

Data from: Breeding site fidelity and winter admixture in a long-distance migrant, the tufted duck (Aythya fuligula)

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bird flu;population structure;Aythya fuligula;bird migration;ducks;2006-2010;phylogeography

DOI：

doi:10.5061/dryad.73n69m01

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of samples from the European and Asian breeding and wintering grounds including some individuals infected with highly pathogenic avian influenza virus H5N1