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Data from: The effects of contig length and depth on the estimation of SNP frequencies, and the relative abundance of SNPs in protein-coding
负责人:
关键词:
454 sequencing;Contig depth;SNP frequency;model selection;genomics;transcriptome;Ambystoma tigrinum;Contig length
DOI:
doi:10.5061/dryad.5pd17
摘要:
-throughput and cost-effective technology, a number of studies have estimated single nucleotide polymorphism (SNP) frequency by calculating the mean numb
Data from: Museum specimens provide reliable SNP data for population genomic analysis of a widely distributed but threatened cockatoo species
负责人:
关键词:
DArTseq;conservation genomics;population genomics;Museum specimens;Calyptorhynchus banksii
DOI:
doi:10.5061/dryad.rb15131
摘要:
and conservation genomics by assessing the biological and technical validity of single nucleotide polymorphism (SNP) data derived from such samples. To achieve this, we gene
Data from: Genome-wide association study of a Varroa-specific defense behavior in honeybees (Apis mellifera)
负责人:
关键词:
Varroa destructor Subject area: Genomics and gene mapping;hygienic behavior;Varroa resistance;candidate genes;SNP array
DOI:
doi:10.5061/dryad.7ds27
摘要:
SNP array to analyze SNPs associated with detection and uncapping of Varroa-parasitized brood by individual worker bees (Apis mellifera). For this study, 22
Data from: Runs of homozygosity and signatures of selection: a comparison among eight local Swiss sheep breeds
负责人:
关键词:
genetic diversity;Ovis aries;SNP;selection signatures;runs of homozygosity (ROH);Inbreeding;sheep breeds
DOI:
doi:10.5061/dryad.8dr637p
摘要:
A dataset consisting of 787 animals with high density SNP chip genotypes (346,774 SNP) and 939 animals with medium density SNP chip genotypes (33,828
Data from: Theory, practice, and conservation in the age of genomics: the Galápagos giant tortoise as a case study
负责人:
关键词:
conservation;population structure;single nucleotide polymorphism;genomics;Chelonoidis;sampling design
DOI:
doi:10.5061/dryad.2hj75
摘要:
of SNPs and 2-5 individuals, or hundreds of SNPs and 10 individuals, but only if the units of analysis are delineated in a way that is consis
Data from: Insights into the genetic architecture of morphological traits in two passerine bird species
负责人:
关键词:
Ficedula albicollis;GWAS;chromosome partitioning;genetic architecture;Passer domesticus;heritability
DOI:
doi:10.5061/dryad.786m4
摘要:
er of causal loci, magnitude of their effects and location in the genome is however still largely unknown. Here we use genome-wide SNP data from
Data from: Rapid identification of chloroplast haplotypes using High-Resolution Melting analysis
负责人:
关键词:
conservation genetics;Arenaria ciliata;phylogeography;Arenaria norvegica;Angiosperms;speciation;Population Genetics - Empirical;Pleistocene
DOI:
doi:10.5061/dryad.s904k
摘要:
generated on uMeltSM. In silico mutation analysis carried out on a 360bp wild-type rps16I amplicon determined that the expected rate of missed SNP detection in vitro
Data from: Comparison of SNPs and microsatellites for fine-scale application of genetic stock identification of Chinook salmon in the Columbia River Basin
负责人:
关键词:
conservation genetics;Oncorhynchus tshawytscha;Fisheries Management;contemporary;Ecological Genetics;Population Genetics - Empirical
DOI:
doi:10.5061/dryad.7986
摘要:
ternative. We tested performance of 13 ?SAT versus 92 SNP loci in a fine-scale application of GSI, using a new baseline for Chinook salmon consisting of 49 collections
Data from: Genomewide scan for adaptive differentiation along altitudinal gradient in the Andrew's toad Bufo andrewsi
负责人:
关键词:
Bufo andrewsi;Genomics\/Proteomics;Amphibians;Ecological Genetics;Adaptation
DOI:
doi:10.5061/dryad.n70c7
摘要:
single nucleotide polymorphisms (SNPs) obtained with restriction site-associated DNA sequencing of pooled samples from 11 populations of Andrew's toad (Bufo andrewsi) from the edge
Data from: Generation of transcript assemblies and identification of single nucleotide polymorphisms from seven lowland and upland cultivars
负责人:
关键词:
SNP switchgrass genome transcript assembly
DOI:
doi:10.5061/dryad.8f73k
摘要:
and to identify single nucleotide polymorphisms (SNPs) for use in breeding and genetic analysis. We also generated individual transcript assemblies for ea

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