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Data from: The phylogenetic utility and functional constraint of microRNA flanking sequences
负责人:
关键词:
flanking sequences;non-coding RNA;microRNA;phylogenetics;Evolution
DOI:
doi:10.5061/dryad.49q24
摘要:
phylogenetic inference. Here, using reference taxa with established phylogenetic relationships, we demonstrate that miRNA sequences are of high utility in quantitative, ra
Data from: The effects of inference method, population sampling and gene sampling on species tree inferences: an empirical study in slender
负责人:
关键词:
Batrachoseps;within-species sampling;subsampling;*BEAST;gene sampling;species tree inference;MP-EST;stem
DOI:
doi:10.5061/dryad.2sc4n
摘要:
Species tree methods are now widely used to infer the relationships among species from multi-locus datasets. Many methods have been developed, which
Data from: Resolving evolutionary relationships in closely related species with whole-genome sequencing data
负责人:
关键词:
gene flow;incomplete lineage sorting;Ficedula;Gene tree;Demographic modeling;Species tree;introgression;phylogenomics;approximate Bayesian computation
DOI:
doi:10.5061/dryad.b6gj8
摘要:
phylogenetic relationships to infer gene tree topologies and visualize genome-wide patterns of gene tree incongruence. Using phylogenetic analysis in nonoverlapping 10-kb
Data from: The pipid root
负责人:
关键词:
Xenopus;Species tree;Coalescence;Gene tree;lineage sorting;high throughout sequencing;pipid;Pipidae
DOI:
doi:10.5061/dryad.66mc094q
摘要:
The estimation of phylogenetic relationships is an essential component of understanding evolution. Accurate phylogenetic estimation is difficult
Data from: Towards robust evolutionary inference with integral projection models
负责人:
关键词:
bighorn sheep;development;evolutionary responses;Body Size;inheritance;Ovis canadensis;regression to the mean;Integral Projection Models
DOI:
doi:10.5061/dryad.708gr
摘要:
ortant features of any model are the ability to (i) characterize relationships among traits (including values of the same traits across ages
Data from: Widespread paleopolyploidy, gene tree conflict, and recalcitrant relationships among the carnivorous Caryophyllales
负责人:
关键词:
Caryophyllales;plant carnivory;gene duplication;paleopolyploidy;phylogenomics;gene tree conflict
DOI:
doi:10.5061/dryad.vn730
摘要:
ed the remaining noncore Caryophyllales as nonmonophyletic, although the node supporting this relationship contained a significant amount of gene tree discordance
Data from: Multiplexed shotgun genotyping resolves species relationships within the North American genus Penstemon
负责人:
关键词:
multiplexed shotgun genotyping;Penstemon;RADseq;phylogenomics;pollination syndrome
DOI:
doi:10.5061/dryad.1q8p3
摘要:
lity of multiplexed shotgun genotyping (MSG), a style of Restriction site-associated DNA sequencing (RADseq), to infer phylogenetic relationships within a subset
Data from: Molecular analysis of H7 avian influenza viruses from Australia and New Zealand: genetic diversity and relationships from 1976 to 2007
负责人:
关键词:
biosecurity;Virus evolution;1976 to 2007
DOI:
doi:10.5061/dryad.1050
摘要:
ch of the genome segments to other sequenced subtype H7 avian influenza A. The inference of phylogenetic relationships for each segment has been used to develop a model
ct of recombination and introgression on species tree inference
负责人:
关键词:
Neogene;recombination;Biogeography;species tree inference;Percidae;Etheostoma lynceum;hybridization;introgression;Pliocene;Etheostoma;Etheostoma zonale;ichthyology;Miocene;Holocene;Teleostei;Pleistocene
DOI:
doi:10.5061/dryad.n7j8q
摘要:
Mitochondrial and nuclear introgression among closely related taxa can greatly complicate the process of determining their phylogenetic relationships

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