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Data from: Aligner optimization increases accuracy and decreases compute times in multi-species sequence data
负责人:
关键词:
Plasmodium falciparum;alignments;Brugia malayi;Wolbachia;metagenomics;bioinformatics;genomics;Homo Sapiens;parasite genomics;dual species RNASeq;microbial genomics
DOI:
doi:10.5061/dryad.m1m0p
摘要:
) relative to bwa-aln. Therefore, we sought to optimize bwa-mem for alignment of data from multi-species samples in order to reduce alignment time and increase
Data from: Chromosome-level reference genome of X12, a highly virulent race of the soybean cyst nematode Heterodera glycines
负责人:
关键词:
Heterodera glycines;X12;Evolution;Soybean cyst nematode;genome assembly;Chromosome scale
DOI:
doi:10.5061/dryad.5b2m501
摘要:
and RNAseq data generated from eggs, second-stage juveniles (J2), third-stage juveniles (J3) and fourth-stage juveniles (J4) of X12, and 79
Data from: Vitellogenin-like A–associated shifts in social cue responsiveness regulate behavioral task specialization in an ant
负责人:
Kohlmeier, Philip
关键词:
Social systems Ants Foraging Animal sociality Gene expression Insects Fats Honey bees
DOI:
doi:10.5061/dryad.s114355
摘要:
to task-related cues, yet experimental evidence is weak. Here we show that a Vitellogenin (Vg) ortholog identified in a RNAseq study on the ant Temnothorax
Data from: Asexual genome evolution in the apomictic Ranunculus auricomus complex: examining the effects of hybridization and mutation accumulation
负责人:
关键词:
Apomixis;SNPs;hybridization;Ranunculus auricomus;Ranunculus;poliploid
DOI:
doi:10.5061/dryad.nk151
摘要:
. RNAseq was used to sequence the flower-specific transcriptomes of 5 genotypes of the Ranunculus auricomus complex, representing 3 sexual and 2 apomictic
Data from: Structure and evolution of the sea star egg receptor for sperm bindin
负责人:
关键词:
Quaternary;gamete recognition;positive selection;EBR1;RNAseq;Patiria miniata
DOI:
doi:10.5061/dryad.s6997
摘要:
protein bindin from the sea star Patiria miniata. I used a simple but effective method for resolving nucleotide polymorphisms into haplotypes for phylogeny-base
Data from: Genomic characterization of the evolutionary potential of the sea urchin Strongylocentrotus droebachiensis facing ocean acidification
负责人:
关键词:
Strongylocentrotus purpuratus;System genetics;gene set variation analysis;Genetic Variation;Plasticity;present;RNAseq;Holocene;climate change
DOI:
doi:10.5061/dryad.1f6t8
摘要:
of metabolism and stress physiology may not be available or economical for large-scale assessments of genetic constraints. We used mRNA se
Data from: Transcriptomic inspection revealed a possible pathway regulating the formation of the high-quality brush hair in Chinese Haimen goat
负责人:
关键词:
Brush Hair;differentially expressed genes;Heat stress;Goat
DOI:
doi:10.5061/dryad.12f01
摘要:
of Chinese Haimen goat (Capra hircus). To unveil the mechanism of the formation of Type III brush hair in Haimen goats, transcriptomic RNAseq technology
Data from: The Opiliones tree of life: shedding light on harvestmen relationships through transcriptomics
负责人:
关键词:
Arachnida;Cyphophthalmi;Eupnoi;Laniatores;RNAseq;Dyspnoi;phylogenomics
DOI:
doi:10.5061/dryad.fs8kv
摘要:
and PCR-based Sanger approaches to infer their systematic relationships. More recently, two studies utilized transcriptomics-based phylogenomics to explore
Data from: The ecological and genetic basis of convergent thick-lipped phenotypes in cichlid fishes
负责人:
关键词:
ecological genomics;cichlid species flocks;adaptive radiation;convergent evolution;RNAseq;East Africa
DOI:
doi:10.5061/dryad.vf1ms
摘要:
The evolution of convergent phenotypes is one of the most interesting outcomes of replicate adaptive radiations. Remarkable cases of convergence
Data from: Early and late response of Nematostella vectensis transcriptome to heavy metals
负责人:
关键词:
Nematostella vectensis;Cnidaria;Nematostella;metal;RNAseq
DOI:
doi:10.5061/dryad.62nk0
摘要:
in molecular ecology and toxicology as it tolerates extreme environments and its genome has been published. Here we employed a transcriptome-wide RNA-Seq approach

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