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Data from: An updated gene atlas for maize reveals organ-specific and stress-induced genes
负责人:
关键词:
B73 AGPv4 differential expression co‐expression presence‐absence variants gene atlas
DOI:
doi:10.5061/dryad.5p58q34
摘要:
function based on co‐expression patterns. Presence/absence variants (PAVs) previously identified using whole genome resequencing data from 61 additional
Data from: Identification of four novel stu-miR169s and their target genes in Solanum tuberosum and expression profiles response to drought stress
负责人:
关键词:
Bioinformatics analysis;potato;alignment;Full-length Amino Acid Sequences;NF-YA genes;Solanum tuberosum;Expression pattern;NF-YA;stu-miR169;drought stress
DOI:
doi:10.5061/dryad.3s057
摘要:
Plant microRNAs are important endogenous gene regulators which regulate gene expression at post-transcriptional level. Previous studies hav
Data from: Transposon variants and their effects on gene expression in Arabidopsis
负责人:
关键词:
Arabidopsis thaliana;genome evolution;Transposable elements;siRNAs
DOI:
doi:10.5061/dryad.8674d
摘要:
sequence polymorphisms and presence of linked TEs are positively correlated with intraspecific variation in gene expression. The expression of genes within 2 kb of conserved TEs is mor
Meta-analysis of gene expression patterns in animal models of prenatal alcohol exposure suggests role for protein synthesis inhibition
负责人:
关键词:
DOI:
doi:10.14288/1.0363480
摘要:
sets. Methods: We assembled ten microarray data sets of gene expression after PAE in mouse and rat models consisting of samples from a total of 63 ethanol-exp
Data from: Transcriptome profiling of maternal stress-induced wing dimorphism in pea aphids
负责人:
关键词:
Alarm Pheromone;crowding;maternal stress;pea aphid;predation;transcriptome profiling;wing dimorphism
DOI:
doi:10.5061/dryad.55b2b15
摘要:
revealed different changes in maternal gene expression as induced by the three stressors. Crowding elicited widespread changes in the expression of genes
Data from: Machine learning-based differential network analysis: a study of stress-responsive transcriptomes in Arabidopsis thaliana
负责人:
关键词:
Systems biology;Arabidopsis thaliana;abiotic\/environmental stress;differential network;bioinformatics;transcriptome analysis;gene coexpression network;Random Forest;Machine Learning
DOI:
doi:10.5061/dryad.41b9g
摘要:
patterns in large-scale data sets. We present an ML-based methodology for transcriptome analysis via comparison of gene coexpression networks, implemented
Data from: X-linkage is not a general inhibitor of tissue-specific gene expression in Drosophila melanogaster
负责人:
关键词:
X suppression;ovary;germline;Malpighian tubule;Accessory Gland;X chromosome;drosophila melanogaster
DOI:
doi:10.5061/dryad.02f6r
摘要:
reporter genes. These findings indicate that, in general, the X chromosome is not a detrimental environment for tissue-specific gene expression and tha
Data from: Temperature stress mediates decanalization and dominance of gene expression in Drosophila melanogaster
负责人:
关键词:
Lab strains;drosophila melanogaster
DOI:
doi:10.5061/dryad.pk045
摘要:
tic and environmental variation affects gene expression by exposing Drosophila melanogaster strains to four different developmental temperatures. At 18°C we observed al
Data from: Transcriptome-wide differential gene expression in Bicyclus anynana butterflies: female vision-related genes are more plastic
负责人:
关键词:
Pigmentation;Photoreceptor;Opsin;Phenotypic Plasticity;Bicyclus anynana;CRAL-TRIO domain protein;sex combs reduced
DOI:
doi:10.5061/dryad.f98s6
摘要:
of vision genes. Here we use a global transcriptomic and candidate gene approach to compare gene expression in the heads of a polyphenic butterfly
Data from: Sequencing-based gene network analysis provides a core set of gene resource for understanding thermal adaptation in Zhikong scallop
负责人:
关键词:
marine bivalve;EcoP15I-tagged digital gene expression;Chlamys farreri;thermal stress;weighted gene coexpression network analysis
DOI:
doi:10.5061/dryad.53j13
摘要:
thermal adaptation. In this study, we conducted transcriptome-wide gene expression profiling of the scallop Chlamys farreri challenged by acute and chronic heat stress

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