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Data from: Biophysically inspired model for functionalized nanocarrier adhesion to cell surface: roles of protein expression and mechanical factors
- 负责人：
- DOI：
- doi:10.5061/dryad.4h76d
- 摘要：
- a computational model to delineate the roles played by target protein expression and mechanical factors of the target cell membrane in determining the avidity
Data from: Reconstruction of velocity fields in electromagnetic flow tomography
- 负责人：
- DOI：
- doi:10.5061/dryad.q2102
- 摘要：
- for EMFT is proposed. The method uses a previously developed finite-element-based computational forward model for computing boundary volta
Data from: Markov-modulated continuous-time Markov chains to identify site- and branch-specific evolutionary variation in BEAST
- 负责人：
- DOI：
- doi:10.5061/dryad.230s5h0
- 摘要：
- on, we show that MMMs impact phylogenetic tree estimation and can substantially improve model fit compared to standard substitution models. Throug
Data from: Computer simulations show that Neanderthal facial morphology represents adaptation to cold and high energy demands, but not heavy biting
- 负责人：
- DOI：
- doi:10.5061/dryad.39272
- 摘要：
- ysis (FEA) and computational fluid dynamics (CFD). This is the most comprehensive application of either approach applied to date and the first to include both. FEA reveals few differences bet
Data from: Swapping birth and death: symmetries and transformations in phylodynamic models
- 负责人：
- DOI：
- doi:10.5061/dryad.57704ft
- 摘要：
- ke a negative value. In the last part of this paper, we describe the relevance of these transformations and their application to computational phylodynamics, parti
Data from: Modeling site heterogeneity with posterior mean site frequency profiles accelerates accurate phylogenomic estimation
- 负责人：
- DOI：
- doi:10.5061/dryad.gv1q5
- 摘要：
- -searching in place of the full mixture model. Compared with widely used empirical mixture models with k classes, our implementation of PMSF in IQ-TREE (http
Data from: Ensembler: enabling high-throughput molecular simulations at the superfamily scale
- 负责人：
- DOI：
- doi:10.5061/dryad.7fg32
- 摘要：
- ious stages of modeling and refinement to produce simulation-ready structures. This includes comparative modeling to all relevant PDB structures (which may span
Data from: A branch-heterogeneous model of protein evolution for efficient inference of ancestral sequences
- 负责人：
- DOI：
- doi:10.5061/dryad.7h66k
- 摘要：
- computational costs and potential overparameterization. Here, we present a new branch-nonhomogeneous and nonstationary model of protein evolution that captures mo
Data from: Describing complex structure-function relationships in biomolecules at equilibrium
- 负责人：
- DOI：
- doi:10.5061/dryad.rr4xgxd5b
- 摘要：
- computational method to handle arbitrarily complex systems.? To demonstrate this approach, we collected a multi-dimensional fluorescence landscape of an engineered
Data from: A morphometric analysis of vegetation patterns in dryland ecosystems
- 负责人：
- Mander, Luke
- DOI：
- doi:10.5061/dryad.5d19r
- 摘要：
- of patterned vegetation produced by a computational model and a small set of satellite images from South Kordofan (South Sudan), which illustrates tha
