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Data from: Elevated substitution rate estimates from ancient DNA: model violation and bias of Bayesian methods
- 负责人：
- DOI：
- doi:10.5061/dryad.1355
- 摘要：
- timation of substitution rate using simulated samples of aDNA and mDNA. We conclude that the current models and priors employed in Bayesian MCMC analysis of heterochronous mtDNA
Data from: A novel Bayesian method for inferring and interpreting the dynamics of adaptive landscapes from phylogenetic comparative data
- 负责人：
- DOI：
- doi:10.5061/dryad.t342m
- 摘要：
- that adaptive hypotheses must be assigned a priori. Here we develop a reversible-jump Bayesian method of fitting multi-optima OU models to phylogenetic
Data from: Bayesian analysis of hybridization and introgression between the endangered european mink (Mustela lutreola) and the polecat
- 负责人：
- DOI：
- doi:10.5061/dryad.8032
- 摘要：
- and genotyped with 13 microsatellite nuclear markers. Recently developed Bayesian methods for assigning individuals to populations and identifying admixture
Data from: Swapping birth and death: symmetries and transformations in phylodynamic models
- 负责人：
- DOI：
- doi:10.5061/dryad.57704ft
- 摘要：
- ticularly to maximum likelihood and Bayesian inference methods, as well as to model selection.
Data from: Bayesian morphological clock methods resurrect placoderm monophyly and reveal rapid early evolution in jawed vertebrates
- 负责人：
- DOI：
- doi:10.5061/dryad.v30f1
- 摘要：
- with incorrect root positions. These simulations also show that Bayesian tip-dated clock methods outperform parsimony when the outgroup is largely uninformative
Data from: Computational performance and statistical accuracy of *BEAST and comparisons with other methods
- 负责人：
- DOI：
- doi:10.5061/dryad.02tf9
- 摘要：
- er of loci required to obtain a given level of accuracy and the situations in which supermatrix or summary methods will be outperformed by the fully Bayesian
Data from: Assessing parameter identifiability in phylogenetic models using Data Cloning
- 负责人：
- DOI：
- doi:10.5061/dryad.rr6400b4
- 摘要：
- The success of model-based methods in phylogenetics has motivated much research aimed at generating new, biologically informative models. This ne
Data from: Modeling character change heterogeneity in phylogenetic analyses of morphology through the use of priors
- 负责人：
- DOI：
- doi:10.5061/dryad.sb8h1
- 摘要：
- this assumption in a Bayesian context. Using empirical datasets, we perform model fitting to illustrate cases in which modeling asymmetric transition rates amo
Data from: Bayesian estimation of fossil phylogenies and the evolution of early to middle Paleozoic crinoids (Echinodermata)
- 负责人：
- 关键词：
- DOI：
- doi:10.5061/dryad.6hb7j
- 摘要：
- probabilistic phylogenetic methods, these recent developments have not previously been applied to the deep-time invertebrate fossil record. Here, I examine
Data from: Molecular species-delimitation methods recover most song-delimited cicada species in the European Cicadetta montana complex
- 负责人：
- DOI：
- doi:10.5061/dryad.7db58
- 摘要：
- Molecular species delimitation is increasingly being used to discover and inform illuminate species level diversity and a number of methods hav
