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Data from: Fossils matter: improved estimates of divergence times in Pinus reveal older diversification
负责人:
关键词:
Bayesian clock dating;node dating;Paleogene;Neogene;fossilized birth-death;molecular clock calibration;phylogeny;Fossil calibration;Pines;Cretaceous;Pinus (L.)
DOI:
doi:10.5061/dryad.74f2r
摘要:
divergence times. We present a revised list of 21 fossils that are suitable to use in dating or comparative analyses of pines. Conclusions: Reliable estimates
Data from: Recommendations for using msBayes to incorporate uncertainty in selecting an ABC model prior: a response to Oaks et al.
负责人:
关键词:
prior;msBayes;Bayesian model averaging;synchronous divergence;approximate Bayesian computation
DOI:
doi:10.5061/dryad.17f8v
摘要:
Prior specification is an essential component of parameter estimation and model comparison in Approximate Bayesian computation (ABC). Oaks et al. pr
Data from: A local evaluation of the individual state-space to scale up Bayesian spatial capture recapture
负责人:
Milleret, Cyril
关键词:
SCR abundance local evaluation of state space
DOI:
doi:10.5061/dryad.42m96c8
摘要:
1. Spatial capture-recapture models (SCR) are used to estimate animal density and to investigate a range of problems in spatial ecology that cann
Data from: Combining statistical inference and decisions in ecology
负责人:
关键词:
DOI:
doi:10.5061/dryad.75756
摘要:
its application to decision problems that occur in ecology. We demonstrate SDT with two types of decisions: Bayesian point estimation, and an applied ma
Data from: Estimating population size in the presence of temporary migration using a joint analysis of telemetry and capture recapture data
负责人:
关键词:
telemetry tagging;Maccullochella macquariensis;temporary migration;Capture recapture;2007-2012;Trout Cod
DOI:
doi:10.5061/dryad.3bn27
摘要:
on when estimating capture probabilities can be used to estimate the abundance and size distribution of a population as though it were closed. 4. Our model provides
Data from: Bayesian divergence-time estimation with genome-wide SNP data of sea catfishes (Ariidae) supports Miocene closure of the Panamania
负责人:
关键词:
Teleosts;Ariidae;molecular clock;fossil record;Dorylinae;SNPs;phylogeny;Miocene;Bayesian inference;Pliocene;RAD sequencing;Pleistocene
DOI:
doi:10.5061/dryad.f8k84
摘要:
-time estimation. However, geological and biological evidence has recently cast doubt on the presumed timing of the initial isthmus closure around 3 Ma but has ins
Data from: Estimating Bayesian phylogenetic information content
负责人:
关键词:
saturation;conditional clade distribution;Entropy;Concatenation;Bayesian;phylogenetics;information
DOI:
doi:10.5061/dryad.1dn50
摘要:
Measuring the phylogenetic information content of data has a long history in systematics. Here we explore a Bayesian approach to informati
Data from: An ancient origin for the enigmatic Flat-Headed Frogs (Bombinatoridae: Barbourula) from the islands of Southeast Asia
负责人:
关键词:
Anura;Bombinatoridae;phylogenetics;Biogeography;Amphibia;Barbourula;Cenozoic;divergence time estimation
DOI:
doi:10.5061/dryad.1914
摘要:
l and nuclear genetic data, multiple fossil calibration points, and likelihood and Bayesian methods, we estimate phylogenetic relationships and divergence times
Data from: Inferring invasive species abundance using removal data from management actions
负责人:
关键词:
Bayesian hierarchical model;removal sampling;feral swine;catch-effort method;population monitoring;Sus scrofa;invasive species
DOI:
doi:10.5061/dryad.67nb3
摘要:
no work in addition to management. We developed a Bayesian hierarchical model to estimate abundance from removal data accounting for varying levels of effort, and use
Data from: Definition and estimation of vital rates from repeated censuses: choices, comparisons and bias corrections focusing on trees
负责人:
关键词:
DOI:
doi:10.5061/dryad.0722b
摘要:
of population change rate (due to changing-frequency bias). 4.We describe and illustrate an individual-based Bayesian procedure for estimating vital rates tha

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