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Data from: Cross-species transferability of SSR loci developed from transcriptome sequencing in lodgepole pine
- 负责人：
- DOI：
- doi:10.5061/dryad.8dk6t78s
- 摘要：
- ulting from 454 pyrosequencing of Pinus contorta cDNA were identified. From these we developed PCR primers for approximately 4000 candidate SSRs. Her
Data from: High-throughput microsatellite isolation through 454 GS-FLX Titanium pyrosequencing of enriched DNA libraries
- 负责人：
- Malausa, Thibaut
- 关键词：
- Population Genetics - Empirical Genomics/Proteomics Bioinfomatics/Phyloinfomatics Fungi Insects genetic markers
- DOI：
- doi:10.5061/dryad.8297
- 摘要：
- e a high-throughput method for isolating microsatellite markers based on coupling multiplex microsatellite enrichment and Next-Generation Sequencing on 454
Data from: Temporal dynamics of plant-soil feedback and root-associated fungal communities over 100 years of invasion by a non-native plant
- 负责人：
- DOI：
- doi:10.5061/dryad.vp530
- 摘要：
- fungal communities in the context of invasion time. 2. We used a plant-soil feedback study and 454 pyrosequencing to investigate pathogen accumulation over 100 yea
Data from: Diversity patterns of uncultured Haptophytes unravelled by pyrosequencing in Naples Bay
- 负责人：
- DOI：
- doi:10.5061/dryad.tv5v1v26
- 摘要：
- Haptophytes are a key phylum of marine protists, including ~300 described morphospecies and 80 morphogenera. We used 454
Data from: A priori and a posteriori approaches for finding genes of evolutionary interest in non-model species: osmoregulatory genes in the kidney transcriptome of the desert rodent Dipodomys spectabilis (banner-tailed kangaroo rat)
- 负责人：
- 关键词：
- 454;Dipodomys spectabilis;water balance;next-generation;molecular evolution;Digital Gene Expression
- DOI：
- doi:10.5061/dryad.sf654
- 摘要：
- a 454 pyrosequencing to characterize genes expressed in the kidney of banner-tailed kangaroo rats (Dipodomys spectabilis). We also determined candidates a posteriori
Data from: The effects of contig length and depth on the estimation of SNP frequencies, and the relative abundance of SNPs in protein-coding and non-coding transcripts of tiger salamanders (Ambystoma tigrinum)
- 负责人：
- DOI：
- doi:10.5061/dryad.5pd17
- 摘要：
- methods of SNP frequency estimation. RESULTS: We used 454 pyrosequencing to identify 2,980 putative SNPs in the eastern tiger salamander (Ambystoma tigrinum
Data from: Reference-free transcriptome assembly in non-model animals from next generation sequencing data
- 负责人：
- Cahais, Vincent
- DOI：
- doi:10.5061/dryad.5g32f94b
- 摘要：
- e, the transcriptomes of five diverse non-model animal species (hare, turtle, ant, oyster and tunicate) were assembled from newly generated 454 and Illumina
Data from: Data concatenation, Bayesian concordance and coalescent-based analyses of the species tree for the rapid radiation of Triturus newts
- 负责人：
- 关键词：
- 454 sequencing;crested newt;Gene tree;transcriptome;multi-species coalescent;Triturus;marbled newt
- DOI：
- doi:10.5061/dryad.mm81p
- 摘要：
- -coding genes, obtained with 454 sequencing. Our dataset includes twenty Triturus newts and represents all nine species. Bayesian analysis of population structure
Data from: Microsatellite analyses across three diverse vertebrate transcriptomes (Acipenser fulvescens, Ambystoma tigrinum, and Dipodomys spectabilis)
- 负责人：
- DOI：
- doi:10.5061/dryad.49s43
- 摘要：
- . In this study, we mined microsatellites from transcriptomes generated by 454-pyrosequencing for three vertebrate species: lake sturgeon (Acipenser fulvescens
Data from: Nitrogen deposition alters plant–fungal relationships: linking belowground dynamics to aboveground vegetation change
- 负责人：
- 关键词：
- Deschampsia cespitosa;root fungi;nitrogen deposition;Geum rossii;454 pyrosequencing;ITS;Helotiales
- DOI：
- doi:10.5061/dryad.sv33f
- 摘要：
- ng 454 pyrosequencing. Host RAF communities were distinct (only 9.4% of OTUs overlapped). N increased RAF diversity in G. rossii, but decreased it in D. cespitosa
