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Data from: Outlier SNPs enable food traceability of the southern rock lobster, Jasus edwardsii
负责人:
关键词:
Jasus edwardsii;population structure;lobster;food traceability;ddRADseq;Adaptation
DOI:
doi:10.5061/dryad.5c960
摘要:
. We have characterized two single-nucleotide polymorphism (SNP) panels comprised in total of 656 SNPs. The first panel contained 535 neutral SNPs and the se
SNP discovery
负责人:
关键词:
Bacillus anthracis;WGS;SNP;1953-2011
DOI:
doi:10.5061/dryad.rc6m9
摘要:
Background: Single nucleotide polymorphisms (SNPs) are ideal signatures for subtyping monomorphic pathogens such as Bacillus anthracis. Her
Data from: The genetic basis of population fecundity prediction across multiple field populations of Nilaparvata lugens
负责人:
关键词:
SNP fecundity brown planthopper predictive model population structure
DOI:
doi:10.5061/dryad.3j6t8
摘要:
s of adaptation and to aid in forecasting population dynamics. In this study, we investigated single nucleotide polymorphisms (SNPs) using candidate gene approach
Data from: The effects of contig length and depth on the estimation of SNP frequencies, and the relative abundance of SNPs in protein-coding
负责人:
关键词:
454 sequencing;Contig depth;SNP frequency;model selection;genomics;transcriptome;Ambystoma tigrinum;Contig length
DOI:
doi:10.5061/dryad.5pd17
摘要:
er of SNPs per unit sequence length (e.g., mean SNPs/kb). However, both read length and contig depth are highly variable and thus raise doubt about simple
Data from: Generation of transcript assemblies and identification of single nucleotide polymorphisms from seven lowland and upland cultivars
负责人:
关键词:
SNP switchgrass genome transcript assembly
DOI:
doi:10.5061/dryad.8f73k
摘要:
and to identify single nucleotide polymorphisms (SNPs) for use in breeding and genetic analysis. We also generated individual transcript assemblies for ea
single nucleotide polymorphisms and 53 genotyping assays
负责人:
Rosel, Patricia E.
关键词:
CATS loci cetacean Conservation Genetics SNP discovery TaqMan? Assays targeted gene approach
DOI:
doi:10.5061/dryad.29ds0
摘要:
Although single nucleotide polymorphisms (SNPs) are commonly used in human genetics, they have only recently been incorporated into genetic studies
Data from: Estimating genomic diversity and population differentiation – an empirical comparison of microsatellite and SNP variation
负责人:
关键词:
microsatellites;genetic diversity;SSR;conservation units;SNPs;population genomics;Expected heterozygosity;Arabidopsis halleri;Pool-Seq;whole-genome re-sequencing
DOI:
doi:10.5061/dryad.11jp5
摘要:
microsatellite variation with genome-wide single nucleotide polymorphisms (SNPs) to assess and quantify potential marker-specific biases and derive recommendations
Data from: Genetic basis of adult migration timing in anadromous steelhead discovered through multivariate association testing
负责人:
关键词:
GWAS;Anadromous fishes;Migratory species;Oncorhynchus mykiss;Holocene
DOI:
doi:10.5061/dryad.62q6n
摘要:
and multivariate Random Forest (RF) machine learning algorithm to conduct association mapping of 15,239 single nucleotide polymorphisms (SNPs) for adult migration
Data from: Identification and validation of single nucleotide polymorphisms as tools to detect hybridization and population structure in freshwater
负责人:
关键词:
genetic fish;conservation tools;NGS techniques;SNPs;hybridization;Potamotrygon
DOI:
doi:10.5061/dryad.1pq21
摘要:
n read length 289 ± 183 bp) detecting a total of 5399 contigs (mean contig length: 396 ± 91 bp). Mining this data set, a panel of 143 in silico SNPs
Data from: SNPs selected by information content outperform randomly selected microsatellite loci for delineating
负责人:
关键词:
microsatellites;honeybee conservation;SNPs;Apis mellifera mellifera;introgression;Apis mellifera ligustica;dark European honeybee;Apis mellifera carnica
DOI:
doi:10.5061/dryad.5vp20
摘要:
mean accuracy was relatively high across datasets (>91%), microsatellites were the least accurate and the top-ranked informative 144 SNPs were the mos

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