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Data from: Reference-free transcriptome assembly in non-model animals from next generation sequencing data
负责人:
Cahais, Vincent
关键词:
Bioinfomatics/Phyloinfomatics Transcriptomics Population Genetics - Empirical Invertebrates
DOI:
doi:10.5061/dryad.5g32f94b
摘要:
Next-generation sequencing (NGS) technologies offer the opportunity for population genomic study of non-model organisms sampled in the wild
Data from: The chimerical genome of Isla del Coco feral pigs (Costa Rica), an isolated population since 1793 but with remarkable levels of diversity
负责人:
关键词:
feral;NGS;Sus scrofa;pig
DOI:
doi:10.5061/dryad.p610q
摘要:
, including the adaptive processes triggered by new environments. Here, we provide a comprehensive genomic study of Isla del Coco (Costa Rica) feral pigs
Data from: -Challenges of NGS in conservation management: insights from long-term monitoring of corridor effects on the genetic diversity of mouse
负责人:
关键词:
genetic diversity;Primates;corridors;MHC;Microcebus ganzhorni;fragmentation;SSCP vs NGS
DOI:
doi:10.5061/dryad.2fh81pd
摘要:
the genotyping performance and estimates of MHC variability generated by SSCP/Sanger-sequencing with those obtained by high throughput sequencing (NGS, Illumina
Data from: Phylogenetic affiliation of SSU rRNA genes generated by massively parallel sequencing: new insights into the freshwater protist diversity
负责人:
关键词:
Protozoa;protist
DOI:
doi:10.5061/dryad.66hc3
摘要:
Recent advances in next-generation sequencing (NGS) technologies spur progress in determining the microbial diversity in various ecosystems
Data from: Genome-wide RAD sequence data provide unprecedented resolution of species boundaries and relationships in the Lake Victoria cichlid adaptive radiation
负责人:
关键词:
cichlid;adaptive radiation;Cichlidae;RAD-seq;phylogenetics;Next Generation Sequencing
DOI:
doi:10.5061/dryad.6300n
摘要:
Although population genomic studies using next generation sequencing (NGS) data are becoming increasingly common, studies focusing
Data from: Using partial aggregation in Spatial Capture Recapture
负责人:
关键词:
Gulo gulo;wolverines
DOI:
doi:10.5061/dryad.pd612qp
摘要:
1. Spatial capture-recapture (SCR) models are commonly used for analyzing data collected using non-invasive genetic sampling (NGS). Opportunistic NGS
Data from: Efficient detection of novel nuclear markers for Brassicaceae by transcriptome sequencing
负责人:
关键词:
Primer-design;Arabidopsis thaliana;primer database;Next-generation sequencing;RNA-seq;phylogenetics;Cardamine hirsuta;Arabis alpina;454 transcriptome sequencing;Brassicaceae
DOI:
doi:10.5061/dryad.63j2j
摘要:
of molecular polymorphisms in nuclear markers. Next-generation sequencing (NGS) techniques nowadays provide a powerful approach to overcome this limitation. We present
Data from: Analysis of microsatellite loci in tree of heaven (Ailanthus altissima (Mill.) Swingle) using SSR-GBS
负责人:
关键词:
genotyping by sequencing;SNP;microsatellite;Amplicon Sequencing;Ailanthus altissima;Tree of heaven
DOI:
doi:10.5061/dryad.873b2j2
摘要:
, next generation sequencing (NGS) has offered advanced techniques for efficiently identifying microsatellite markers and accurately genotyping samples. Here, we identify ne
Data from: Reporting tumor molecular heterogeneity in histopathological diagnosis
负责人:
关键词:
Homo Sapiens;Next-generation sequencing;Personalized therapy;Molecular heterogeneity;Cancer;Histopathological diagnosis
DOI:
doi:10.5061/dryad.hf93m
摘要:
next-generation sequencing (TM-NGS) in characterizing gastrointestinal cancer molecular heterogeneity. Methods: 35 gastrointestinal tract tumors, five of each intestinal
Data from: A NGS approach to the encrusting Mediterranean sponge Crella elegans (Porifera, Demospongiae, Poecilosclerida): transcriptome sequencing
负责人:
Pérez-Porro, Alicia R.
关键词:
Crella elegans de novo assembly transcriptome characterization Mediterranean sponge life cycle stages
DOI:
doi:10.5061/dryad.50dc6
摘要:
and transcriptome sequencing in a cost-effective manner. Here we present the first NGS (next-generation sequencing) approach to understanding the life cycle of an encrusting

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