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Data from: Recent and dynamic transposable elements contribute to genomic divergence under asexuality
负责人:
关键词:
Asexuality;Apomixis;Taraxacum officinale;Methylation;genome evolution;Dandelion;Transposable elements
DOI:
doi:10.5061/dryad.f2j00
摘要:
up to 38.6 % of the homoploid genome. The repetitive compartment is dominated by LTR retrotransposon families accompanied by few non-LTR retrotransposons
Data from: Speciation network in Laurasiatheria: retrophylogenomic signals
负责人:
关键词:
Carnivora;incomplete lineage sorting;Cetartiodactyla;Eulipotyphla;phylogenomic network;retrotransposons;Cretaceous;genome mosaic;retrophylogenomics;Perissodactyla;Chiroptera;Pholidota;Laurasiatheria
DOI:
doi:10.5061/dryad.71s06
摘要:
h enigmatic affiliations. We performed whole-genome screenings for phylogenetically diagnostic retrotransposon insertions involving the representatives bat
Data from: Genome-wide variation in nucleotides and retrotransposons in alpine populations of Arabis alpina (Brassicaceae)
负责人:
关键词:
Arabis alpina<\/i>;Single-nucleotide polymorphisms;linkage disequilibrium;whole-genome re-sequencing;Arabis alpina;Transposable elements;Genome-wide diversity
DOI:
doi:10.5061/dryad.58g217k
摘要:
as well as polymorphic long terminal repeat retrotransposons (polymorphic TEs; i.e. presence/absence of TE insertions at specific loci). We identified 291,396 SNPs and 20
Data from: The landscape of transposable elements and satellite DNAs in the genome of a dioecious plant spinach (Spinacia oleracea L.)
负责人:
关键词:
DOI:
doi:10.5061/dryad.4053d31
摘要:
tegies. A total of 16,002 full-length TEs were identified. Among the most abundant long terminal repeat (LTR) retrotransposons (REs), Copia elements wer
Data from: The relationship of recombination rate, genome structure, and patterns of molecular evolution across angiosperms
负责人:
关键词:
LTR retrotransposons;dN\/dS;recombination rate;genome size
DOI:
doi:10.5061/dryad.10nh8
摘要:
and its effects on genome evolution across plants are largely unknown. Recombination can reduce genome size by enabling the removal of LTR retrotransposons, alter
Data from: Genomic dynamics of transposable elements in the Western Clawed Frog (Silurana tropicalis)
负责人:
关键词:
GC content;natural selection;African clawed frogs;genome evolution;Xenopus tropicalis;gene expression;Silurana tropicalis
DOI:
doi:10.5061/dryad.76487
摘要:
) and non-LTR retrotransposons were fixed at only 4 of 16 sites and at low frequency at 12 of 16. A maximum likelihood model failed to attribute these differences in ins
Data from: Differential effect of selection against LINE retrotransposons among vertebrates inferred from whole-genome data and demographic modeling
负责人:
关键词:
purifying selection;comparative population genomics;retrotransposons;Transposable elements;approximate Bayesian computation;composite likelihood optimization
DOI:
doi:10.5061/dryad.qd300cb
摘要:
ine stickleback, green anole, and house mouse, as well as three human populations. Specifically, we inferred a null demographic background utilizing SNP data, which
Data from: A positively selected APOBEC3H haplotype is associated with natural resistance to HIV-1 infection
负责人:
关键词:
cytidine deaminase genes;haplotype;HIV-1 infection;APOBEC3H;positive selection
DOI:
doi:10.5061/dryad.n3373
摘要:
APOBEC3 genes encode cytidine deaminases endowed with the ability to inhibit retroviruses and retrotransposons. These genes have been targets
Data from: A genome for gnetophytes and early evolution of seed plants
负责人:
关键词:
DOI:
doi:10.5061/dryad.0vm37
摘要:
genomic features, such as a diverse assemblage of retrotransposons with evidence for elevated frequencies of elimination rather than accumulation, considera

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