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Data from: Molecular and fossil evidence place the origin of cichlid fishes long after Gondwanan rifting
负责人:
关键词:
Paleogene;Neogene;molecular clock;Biogeography;fossil record;Percomorpha;Actinopterygii;Cichlidae;vicariance;Teleostei
DOI:
doi:10.5061/dryad.48f62
摘要:
independent palaeontological and relaxed-molecular-clock estimates for the time of cichlid origin that collectively reject the antiquity of the group required
Data from: Molecular phylogeny of rhynchonellide articulate brachiopods (Brachiopoda, Rhynchonellida)
负责人:
关键词:
Rhynchonelliformea;Palaeozoic;Holocene;phylogeny;Mesozoic
DOI:
doi:10.5061/dryad.79411
摘要:
) and Bayesian (relaxed-clock) analyses all find a tree topology that disagrees strongly with the existing superfamily classification. All tested
Data from: Multi-locus sequence data reveal a new species of coral reef goby (Teleostei: Gobiidae: Eviota), and evidence of Pliocene vicariance ac
负责人:
关键词:
dwarf goby;center of overlap;Eviota punyit sp. nov.;Miocene;systematics;Pliocene;Pleistocene
DOI:
doi:10.5061/dryad.n0v50
摘要:
, Indian Ocean and Red Sea. Relaxed molecular clock divergence time estimation indicates a Pliocene origin for the new species, and the current distribution
Data from: A synchronized global sweep of the internal genes of modern avian influenza virus
负责人:
关键词:
influenza A virus;phylogenetics;Host-specific local clock
DOI:
doi:10.5061/dryad.m04j9
摘要:
cessary for reliable phylogenetic inference of IAV and that methods that do not do so, including ‘relaxed’ molecular clock models, can be positively misleading
Data from: Molecular paleobiology of early-branching animals integrating DNA and fossils elucidates the evolutionary history of hexactinellid
负责人:
Woerheide, Gert
关键词:
molecular paleobiology molecular clocks Bayesian
DOI:
doi:10.5061/dryad.sm01b
摘要:
exactinellida in a Bayesian relaxed molecular clock framework. With some notable exceptions, our results are largely congruent with interpretations of the hexactinellid
Data from: Genomic Signature of an Avian Lilliput Effect across the K-PG Extinction
负责人:
关键词:
divergence time;Paleogene;extinction;molecular clocks;divergence times;life-history evolution;Body Size;Metabolic Rate;mass extinction;K-Pg;Birds;Cretaceous
DOI:
doi:10.5061/dryad.nr654
摘要:
. This ‘hidden’ rate acceleration may result in both strict and relaxed molecular clocks over-estimating the age of the avian crown group through the rela
Data from: Timing marine-freshwater transitions in the diatom order Thalassiosirales
负责人:
关键词:
Thalassiosira pseudonana;molecular clock;diatoms;Thalassiosirales;Eocene;Freshwater;Miocene;Cyclotella nana;Marine
DOI:
doi:10.5061/dryad.85q50
摘要:
relaxed molecular clock methods under a range of fossil calibration schemes. Although I found no support for the Eocene fossil dates, the two major freshwater colonization
Data from: SimPhy: phylogenomic simulation of gene, locus and species trees
负责人:
关键词:
Multilocus Coalescent;Species tree;gene family evolution;Multispecies coalescent;incomplete lineage sorting;Simulation;substitution rate;Gene duplication and loss;gene conversion;Locus tree;Horizontal gene transfer
DOI:
doi:10.5061/dryad.707td
摘要:
s of substitution rate variation among lineages (uncorrelated relaxed clocks) and the capability of simulating partitioned nucleotide, codon, and protein multiloc
Data from: New DNA data from a Transthyretin nuclear intron suggest an Oligocene to Miocene diversification of living South America opossums
负责人:
关键词:
evolutionary dynamics;Didelphidae;Marsupialia;Transthyretin intron 1;molecular systematics;molecular dating;Cenozoic;Mitochondrial and nuclear markers
DOI:
doi:10.5061/dryad.8505
摘要:
by the presence of synapomorphic indels observed in TTR intron 1. A Bayesian relaxed molecular clock dating of didelphid evolution using nuclear markers estimated thei
Data from: Evolutionary history of chimpanzees inferred from complete mitochondrial genomes
负责人:
关键词:
chimpanzee;phylogeny;Pan troglodytes;Evolution;relaxed molecular clock;Yule;coalescent
DOI:
doi:10.5061/dryad.1862
摘要:
ng a ‘relaxed molecular clock,’ fossil calibrations, and 12 additional complete primate mitochondrial genomes, we analyzed the pattern and timing of primate diversification

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