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Data from: Evolution of conjugation and type IV secretion systems
负责人:
关键词:
DOI:
doi:10.5061/dryad.p8b82
摘要:
Genetic exchange by conjugation is responsible for the spread of resistance, virulence and social traits among prokaryotes. Recent works unraveled
Data from: Amplicon pyrosequencing late Pleistocene permafrost: the removal of putative contaminant sequences and small-scale reproducibility
负责人:
Porter, Teresita
关键词:
ancient DNA contamination reproducibility barcoding Beringia amplicon pyrosequencing
DOI:
doi:10.5061/dryad.4m7d1
摘要:
s the small-scale reproducibility of taxonomic composition obtained from sequencing four molecular markers (mitochondrial 12S ribosomal DNA (rDNA), prokaryote
Data from: Locality or habitat? Exploring predictors of biodiversity in Amazonia
负责人:
关键词:
Metabarcoding;Operational Taxonomic Units (OTUs);Biodiversity gradient
DOI:
doi:10.5061/dryad.4hv2b38
摘要:
prokaryote and eukaryote diversity in environmental soil and litter samples from 39 survey plots in a longitudinal transect across Brazilian Amazonia using 16S
Data from: Expression of eukaryotic-like protein in the microbiome of sponges
负责人:
关键词:
ELP;metatranscriptomics;sponges;Host interactions;symbiont
DOI:
doi:10.5061/dryad.7717q
摘要:
Eukaryotic-like proteins (ELPs) are classes of proteins that are found in prokaryotes, but have a likely evolutionary origin in eukaryotes. ELPs hav
Data from: Gene similarity networks provide new tools for understanding eukaryote origins and evolution
负责人:
关键词:
DOI:
doi:10.5061/dryad.qr81p
摘要:
e of alternative analytical tools. We reconstructed a gene similarity network comprising the proteomes of 14 eukaryotes, 104 prokaryotes, 2,389 viruses and 1,044
Data from: A rapid and scalable method for multilocus species delimitation using Bayesian model comparison and rooted triplets
负责人:
关键词:
Bayesian model comparison;Bacterial species;Bacillus;Multilocus species delimitation;Dynamic programming;present
DOI:
doi:10.5061/dryad.3cb25
摘要:
with increasing sample sizes. Analyses of empirical data from both eukaryotes and prokaryotes demonstrate its potential for delimiting species in real cases.
Data from: Ecosystem biomonitoring with eDNA: metabarcoding across the tree of life in a tropical marine environment
负责人:
关键词:
eukaryotes;ecosystem based management;biodiversity;prokaryotes;Environmental DNA;shotgun sequencing
DOI:
doi:10.5061/dryad.qq11c
摘要:
eDNA from seawater using a shotgun approach resulted in only 0.34% of 22.3 million reads assigning to eukaryotes, highlighting the inefficiency
Data from: A recently transferred cluster of bacterial genes in Trichomonas vaginalis –lateral gene transfer and the fate of acquired genes.
负责人:
关键词:
Trichomonas vaginalis;phylogeny;Lateral gene transfer (LGT);Peptoniphilus harei
DOI:
doi:10.5061/dryad.30r6p
摘要:
Background: Lateral Gene Transfer (LGT) has recently gained recognition as an important contributor to some eukaryote proteomes, but the mechanisms
Data from: The evolution of phylogeographic datasets
负责人:
关键词:
prokaryotes DNA sequences information content phylogeography sampling single nucleotide polymorphisms temporal trends eukaryotes
DOI:
doi:10.5061/dryad.10sg7
摘要:
Empirical phylogeographic studies have progressively sampled greater numbers of loci over time, in part motivated by theoretical papers showing tha
Data from: A microbiotic survey of lichen-associated bacteria reveals a new lineage from the Rhizobiales
负责人:
关键词:
Alphaproteobacteria;backbone constraint;microbiota;Acetobacteraceae;Methylobacterium;16S;non-photosynthetic bacteria;Rhizobiales;Brucellaceae;Acidobacteria;LAR1;maximum likelihood;lichens;Bayesian inference;nitrogen fixation;primers
DOI:
doi:10.5061/dryad.g35nt67k
摘要:
(i.e., Cyanobacteria or chloroplasts of algae). This effectively masked the presence of other lichen-associated prokaryotes. In order to facilitate the study

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