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Data from: Whole plastome sequencing reveals deep plastid divergence and cytonuclear discordance between closely related balsam popla
负责人:
关键词:
Natural Selection and Contemporary Evolution Molecular Evolution Speciation Genomics/Proteomics
DOI:
doi:10.5061/dryad.nj5h5
摘要:
studies with nuclear loci indicate that the two species (or subspecies) diverged since the late Pleistocene, whereas their plastomes indicate deep
Data from: A long PCR based approach for DNA enrichment prior to next-generation sequencing for systematic studies
负责人:
关键词:
Lupinus leucophylla Douglas ex Lindl.;Abies fraseri (Pursh) Poir;Castilleja linariifolia Benth.;Castilleja covilleana L.F.Hend.;Castilleja elmeri Fernald;Crataegus columbiana Howell;Bartsia inaequalis Benth.;Abies amabilis Douglas ex J.Forbes;Castilleja ortegae Standl.;Abies grandis (Douglas ex D. Don) Lindley;Poa bulbosa L.;Nuphar polysepalum Engelm.;Castilleja pallescens Greenm.;Next-generation sequencing;Universal Chloroplast PCR Primers;Penstemon montanus Greene var idahoensis (Keck) Cronq.;Bromus tectorum L.;Long PCR;Castilleja applegatei Fernald;Capsella bursa-pastoris (L.) Medik.;Castilleja miniata Douglas ex Hook.;Salix scouleriana Barrat ex. Hook.;Chloroplast Enrichment;Alnus rhombifolia Nutt.;Balsamorhiza sagittata (Pursh) Nutt.;Castilleja lineariloba (Benth.) T.I.Chuang & Heckard;Plastome;Castilleja victoriae Fairbarns & J.M.Egger;Castilleja arvensis Cham. & Schltdl.;Lomatium dissectum (Nutt) Mathias & Constance;Castilleja virgata (Domb. ex Wedd.) Edwin;Balsamorhiza hookeri Nutt;Bartsia stricta (Kunth) Benth.;Polygonum douglasii Greene;Castilleja oresbia Greenm.;Angiosperms;Lamourouxia virgata Kunth;Umbellularia californica (Hook. & Arn.) Nutt.;Senecio integerrimus Nutt. var exaltatus (Nutt.) Cronq.
DOI:
doi:10.5061/dryad.kc75n
摘要:
. Conclusions: Although here we tested this approach by sequencing plastomes, long PCR amplicons could be generated using DNA from any genome, expanding
Data from: Phylogenomics and historical biogeography of the monocot order Liliales: out of Australia and through Antarctica
负责人:
关键词:
DOI:
doi:10.5061/dryad.mc736
摘要:
genera, and 97 additional plastomes stratified across angiosperm lineages. We used a supermatrix approach to extend our analysis to 58 of 64 genera
Data from: Genome skimming reveals the origin of the Jerusalem Artichoke tuber crop species: neither from Jerusalem nor an Artichoke
负责人:
关键词:
allopolyploid speciation phylogenomics polyploid parentage polyploidy ultra-barcoding
DOI:
doi:10.5061/dryad.138vs
摘要:
ng complete plastomes (151 551 bp), partial mitochondrial genomes (196 853 bp) and 35S (8196 bp) and 5S (514 bp) ribosomal DNA. Our results refute
Data from: Embracing discordance: phylogenomic analyses provide evidence for allopolyploidy leading to cryptic diversity in a Mediterranean Campanula
负责人:
关键词:
polyploidy;Campanula erinus;Campanulaceae;Campanula;hybridization;phylogenomics;cryptic diversity
DOI:
doi:10.5061/dryad.hn06n
摘要:
, and C. simulans. This study takes a phylogenomic approach, utilizing near-complete plastomes and 130 nuclear loci, to uncover cryptic diversity and test hypotheses
Data from: The unexpected depths of genome-skimming data: a case study examining Goodeniaceae floral symmetry genes
负责人:
关键词:
CYCLOIDEA;floral symmetry;Goodeniaceae;genome skimming
DOI:
doi:10.5061/dryad.0500c
摘要:
(e.g., plastomes); however, researchers may be overlooking data in low abundance that could be used for phylogenetic or evo-devo studies. Here, we present
Data from: Phylogenomic analysis of the explosive adaptive radiation of the Espeletia complex (Asteraceae) in the tropical Andes
负责人:
关键词:
adaptive radiation;Espeletiinae;caulescent rosette;Páramo;tropical high-elevation;Hybridisation;explosive diversification;phylogenomics
DOI:
doi:10.5061/dryad.m1t32
摘要:
of all morphological groups of Espeletiinae, using whole plastomes and about a million nuclear nucleotides obtained with an original de novo assembly

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