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Data from: Whole plastome sequencing reveals deep plastid divergence and cytonuclear discordance between closely related balsam popla
- 负责人:
- 关键词:
- Natural Selection and Contemporary Evolution Molecular Evolution Speciation Genomics/Proteomics
- DOI:
- doi:10.5061/dryad.nj5h5
- 摘要:
- studies with nuclear loci indicate that the two species (or subspecies) diverged since the late Pleistocene, whereas their plastomes indicate deep
Data from: From algae to angiosperms–inferring the phylogeny of green plants (Viridiplantae) from 360 plastid genomes
- 负责人:
- DOI:
- doi:10.5061/dryad.k1t1f
- 摘要:
- from available complete or nearly complete plastid genome data. Results: We assembled protein-coding sequence data for 78 genes from 360 diverse
Data from: A long PCR based approach for DNA enrichment prior to next-generation sequencing for systematic studies
- 负责人:
- DOI:
- doi:10.5061/dryad.kc75n
- 摘要:
- . Conclusions: Although here we tested this approach by sequencing plastomes, long PCR amplicons could be generated using DNA from any genome, expanding
Data from: The sugarcane mitochondrial genome: assembly, phylogenetics and transcriptomics
- 负责人:
- DOI:
- doi:10.5061/dryad.634d24h
- 摘要:
- the chloroplast genome of SP80-3280 using transcriptomic data only. Phylogenomic analysis using mitogenomes allow closely related sugarcane cultivars to be distinguished
Data from: Phylogenomics and historical biogeography of the monocot order Liliales: out of Australia and through Antarctica
- 负责人:
- 关键词:
- DOI:
- doi:10.5061/dryad.mc736
- 摘要:
- genera, and 97 additional plastomes stratified across angiosperm lineages. We used a supermatrix approach to extend our analysis to 58 of 64 genera
Data from: Genome skimming reveals the origin of the Jerusalem Artichoke tuber crop species: neither from Jerusalem nor an Artichoke
- 负责人:
- DOI:
- doi:10.5061/dryad.138vs
- 摘要:
- ng complete plastomes (151 551 bp), partial mitochondrial genomes (196 853 bp) and 35S (8196 bp) and 5S (514 bp) ribosomal DNA. Our results refute
Data from: Embracing discordance: phylogenomic analyses provide evidence for allopolyploidy leading to cryptic diversity in a Mediterranean Campanula
- 负责人:
- 关键词:
- polyploidy;Campanula erinus;Campanulaceae;Campanula;hybridization;phylogenomics;cryptic diversity
- DOI:
- doi:10.5061/dryad.hn06n
- 摘要:
- , and C. simulans. This study takes a phylogenomic approach, utilizing near-complete plastomes and 130 nuclear loci, to uncover cryptic diversity and test hypotheses
Data from: The unexpected depths of genome-skimming data: a case study examining Goodeniaceae floral symmetry genes
- 负责人:
- DOI:
- doi:10.5061/dryad.0500c
- 摘要:
- (e.g., plastomes); however, researchers may be overlooking data in low abundance that could be used for phylogenetic or evo-devo studies. Here, we present
Data from: Phylogenomic analysis of the explosive adaptive radiation of the Espeletia complex (Asteraceae) in the tropical Andes
- 负责人:
- DOI:
- doi:10.5061/dryad.m1t32
- 摘要:
- of all morphological groups of Espeletiinae, using whole plastomes and about a million nuclear nucleotides obtained with an original de novo assembly