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Data from: Conserved genes, sampling error, and phylogenomic inference
负责人:
关键词:
Sampling error;Incongruence;Yeast;Systematic error;Strong phylogenetic signal;phylogenomics;Slowly-evolving genes
DOI:
doi:10.5061/dryad.157d7
摘要:
s with strong phylogenetic signals. Their conclusion that strong signal reduces incongruence is drawn from the comparative phylogenetic analysis of protein al
Data from: Phylogenetic signal in diatom ecology: perspectives for aquatic ecosystems biomonitoring
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关键词:
Ecological optima;Bacillariophyta;phylogenetic signal;phylogeny;bioassessment;diatoms;Freshwater diatoms
DOI:
doi:10.5061/dryad.0db3f
摘要:
ween taxonomic resolution and bioassessment quality. Phylogenetic tools may form the bases of new more efficient approaches for biomonitoring if relationships between ecolog
Data from: Phylogenetic measures of plant communities show long-term change and impacts of fire management in tallgrass prairie remnants
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关键词:
beta diversity;functional diversity;Fire management;alpha diversity;Ecological restoration;Environmental filtering;community assembly;temporal dynamics
DOI:
doi:10.5061/dryad.763v6
摘要:
esponse to fire management. Phylogenetic approaches to ecological analysis are increasingly accessible, but fuller understanding of phylogeny–trait relati
Data from: Testing and quantifying phylogenetic signals and homoplasy in morphometric data
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关键词:
Procrustes superposition;shape;Drosophila;phylogeny;squared-change parsimony;Geometric morphometrics;Homoplasy;Drosophilidae
DOI:
doi:10.5061/dryad.38gr5821
摘要:
The relationship between morphometrics and phylogenetic analysis has long been controversial. Here we propose an approach that is based on mapping
Data from: Pan-genome and phylogeny of Bacillus cereus sensu lato
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关键词:
Bayesian model-based clustering;Bacillus cereus group;Bacillus cereus;Bacillus cereus sensu lato;Pan-genome;phylogenetic clustering;Bacillus;phylogenetics;Pan-GWAS;phylogeny
DOI:
doi:10.5061/dryad.dm82j
摘要:
based approach (Mash) was used to create reduced representations of selected Bacillus genomes, and a fast distance-based phylogenetic analysis
Data from: Evolutionary history shapes patterns of mutualistic benefit in Acacia-rhizobial interactions
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关键词:
specialist;symbiosis;generalist;Acacia;Interaction;phylogeny;Rhizobium;nitrogen fixation;Mesorhizobium;Bradyrhizobium
DOI:
doi:10.5061/dryad.n5328
摘要:
rhizobial bacteria. Using phylogenetic comparative methods we compared patterns of variation in mutualistic benefit to rhizobial phylogenies constructed from
Data from: Taxonomy and phylogeny can yield comparable results in comparative palaeontological analyses
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关键词:
Phylogeny Taxonomy Fossil record PGLS Extinction clustering Phylogenetic signal Evolutionary mode
DOI:
doi:10.5061/dryad.pt3qm
摘要:
Many extinct taxa with extensive fossil records and mature taxonomic classifications have not yet been the subject of formal phylogenetic analysis
Data from: Reticulate evolutionary history and extensive introgression in mosquito species revealed by phylogenetic network analysis
负责人:
关键词:
Bioinfomatics/Phyloinfomatics Genomics/Proteomics Hybridization Insects Molecular Evolution Phylogenetic Theory and Methods
DOI:
doi:10.5061/dryad.tn47c
摘要:
d in the study, phylogenetic networks provide a more natural model to capture reticulate evolutionary histories. In this work, we reanalyse the Anopheles data usi
Data from: Phylogeny, ecology and deep time: 2D outline analysis of anuran skulls from the Early Cretaceous to Recent
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关键词:
Outline analysis;Macroevolution;Cranial morphology;disparity;Skull evolution;Anuran skulls
DOI:
doi:10.5061/dryad.2gf6910
摘要:
signal, this shift appears to be largely driven by phylogeny and was not significant after phylogenetic correction (R2 = 0.26, p = 0.22). This study
Data from: Allele phasing has minimal impact on phylogenetic reconstruction from targeted nuclear gene sequences in a case study of Artocarpus
负责人:
关键词:
Artocarpus;incomplete lineage sorting;Target Enrichment;phylogenetics;allele phasing;HybSeq;alleles
DOI:
doi:10.5061/dryad.r8q72
摘要:
s not have a clear effect on phylogenetic resolution or topological consistency. Conclusions: We provide a framework for inferring phased alleles from

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