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Data from: Probabilistic methods outperform parsimony in the phylogenetic analysis of data simulated without a probabilistic model
负责人:
关键词:
Likelihood;morphology;parsimony;Simulation;Bayesian;phylogenetics
DOI:
doi:10.5061/dryad.h8r2629
摘要:
studies have suggested that analyses of morphological character data using the Bayesian and Maximum likelihood Mk model provide phylogenies of higher
Data from: Inferring bounded evolution in phenotypic characters from phylogenetic comparative data
负责人:
关键词:
bounds;Macroevolution;evolutionary constraints;BBM;maximum-likelihood estimation;phylogenetic comparative data
DOI:
doi:10.5061/dryad.k974s
摘要:
ry different kind. We provide analytical expressions for the likelihood of BBM and present a method to calculate the likelihood numerically
Data from: c-Myc gene sequences and the phylogeny of bats and other eutherian mammals
负责人:
关键词:
DNA sequences;maximum likelihood;eutherian mammals;phylogeny;c-myc gene
DOI:
doi:10.5061/dryad.590
摘要:
, and maximum likelihood approaches were adopted, with the most sophisticated involving the separate, then combined, likelihood analyses of the third codon positions
Data from: Time-dependent speciation and extinction from phylogenies: a least squares approach
负责人:
关键词:
extinction;Agamidae;extinction;Birth-death;phylogeny;Catarrhinae;diversification;speciation;Birth-death;speciation
DOI:
doi:10.5061/dryad.7891
摘要:
on previous published works, I derive maximum likelihood estimators. Some limitations of the likelihood approach are described, and a fitting procedure based
Data from: Comparing evolutionary rates between trees, clades, & traits
负责人:
关键词:
Comparative Methods;Phrynosomatinae;maximum likelihood;phylogeny;Liolaemini
DOI:
doi:10.5061/dryad.5st8m
摘要:
the typical downward bias expected for maximum likelihood estimates of the variance, but only for very small trees. We find that evolutionary rates ar
Data from: Quantifying age-dependent extinction from species phylogenies
负责人:
关键词:
coalescent point process;Macroevolution;phylogenetics;diversification;Solanaceae;Aves;maximum likelihood estimation
DOI:
doi:10.5061/dryad.7894h
摘要:
esent here a computational framework to quantify age-dependent extinction through maximum likelihood parameter estimation based on phylogenetic trees
Data from: Bayesian adaptive Markov Chain Monte Carlo estimation of genetic parameters
负责人:
关键词:
Hordeum vulgare L.
DOI:
doi:10.5061/dryad.0p88f
摘要:
(residual maximum likelihood) estimates. Moreover, our exponential prior for inverse variance components was vague and enabled the estimated mode of the posterior variance
Data from: Maximum likelihood inference of small trees in the presence of long branches
负责人:
关键词:
DOI:
doi:10.5061/dryad.rp7qv
摘要:
The statistical basis of maximum likelihood (ML), its robustness and the fact that it appears to suffer less from biases lead to it being one
Data from: A likelihood-based comparison of population histories in a parasitoid guild
负责人:
关键词:
comparative phylogeography;Late Pleistocene;Mesopolobus amaenus;Hobbya stenonota;Population Divergence;Cecidostiba semifascia;community assembly;maximum likelihood;Cecidostiba fungosa
DOI:
doi:10.5061/dryad.0g0fs
摘要:
galls. We develop a likelihood method to numerically estimate models of divergence between three populations from multilocus data. We investigate

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