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Data from: Species delimitation in fungal endophyte diversity studies and its implications in ecological and biogeographic inferences
负责人:
关键词:
barcode of fungi;Species complex;species identification;genealogical sorting index;fungal biodiversity;genetic markers
DOI:
doi:10.5061/dryad.8891
摘要:
yses (gpd, ITS, and tef1) and modern techniques for phylogenetic species delimitation were overlaid with ecological data to recognize putative species or OTUs
Data from: Biogeographical evidence for common vicariance and rare dispersal in a southern Appalachian harvestman (Sabaconidae, Sabacon cavicolens)
负责人:
关键词:
glacial refugia;competitive exclusion;short-range endemism;Sabaconidae;Opiliones;long distance dispersal;Sabacon;riverine barrier;Holocene;Dyspnoi;cryptic species;Pleistocene
DOI:
doi:10.5061/dryad.mk32s
摘要:
ng multispecies coalescent analyses. We also tested whether riverine barriers are associated with mitochondrial genealogical structuring, focusing on multiple rivers
Data from: Genealogy and palaeodrainage basins in Yunnan Province: phylogeography of the Yunnan spiny frog, Nanorana yunnanensis (Dicroglossidae)
负责人:
关键词:
mtDNA;Early Pleistocene;Early Pliocene;Nanorana yunnanensis;Amphibians;Nanorana bourreti;drainage history
DOI:
doi:10.5061/dryad.1580
摘要:
and not experienced population expansion, bottlenecking and selection. Genealogical analyses identified three, major, well-supported maternal lineages, each of which ha
Data from: Molecular phylogeny of rhynchonellide articulate brachiopods (Brachiopoda, Rhynchonellida)
负责人:
关键词:
Rhynchonelliformea;Palaeozoic;Holocene;phylogeny;Mesozoic
DOI:
doi:10.5061/dryad.79411
摘要:
s of fossils, the independent, genealogical evidence and phylogenetic inferences about extant forms that they make possible are highly relevant
Data from: Genealogical lineage sorting leads to significant, but incorrect Bayesian multilocus inference of population structure
负责人:
关键词:
conservation genetics;phylogeography;Invertebrates;drosophila melanogaster;Population Genetics - Empirical
DOI:
doi:10.5061/dryad.8038
摘要:
as a molecular marker, it has become apparent that selection and genealogical lineage sorting could lead to erroneous inferences. As it is not clear to what extent
Data from: Inferring fitness landscapes and selection on phenotypic states from single-cell genealogical data
负责人:
关键词:
lineage analysis;evolutionary dynamics;fitness landscape;population growth rate;phenotypic selection;single-cell analysis
DOI:
doi:10.5061/dryad.4539d
摘要:
of a proliferating population. We introduce and apply a practical empirical method to quantify the fitness landscapes of arbitrary phenotypic traits, using genealogical
Data from: Phylogeography of amphi-boreal fish: tracing the history of the Pacific herring Clupea pallasii in North-East European seas
负责人:
关键词:
mtDNA;phylogeography;Trans-Arctic colonization;Amphi-boreal fauna;Time-dependent rates;Clupea pallasii
DOI:
doi:10.5061/dryad.q31f8
摘要:
ng genealogical information from mitochondrial DNA sequence data. The Pacific and Atlantic herrings (Clupea pallasii and C. harengus) have basical
Data from: Is the tree of life the best metaphor, model or heuristic for phylogenetics?
负责人:
关键词:
affinity network;genealogical network;Modeling;phylogenetic network
DOI:
doi:10.5061/dryad.qh53c
摘要:
e back to the beginnings of phylogenetic analysis. We can learn from this history. Second, I point out that the use of a tree as a model pre-supposes
Data from: Genealogical working distributions for Bayesian model testing with phylogenetic uncertainty
负责人:
关键词:
working distribution;marginal likelihood;MCMC;phylogenetics;Bayes factor;Bayesian inference;coalescent model
DOI:
doi:10.5061/dryad.8tm76
摘要:
a “working” distribution on the space of genealogies, that enables estimating marginal likelihoods while accommodating phylogenetic uncertainty. We propose

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