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Data from: Analyzing negative feedback using a synthetic gene network expressed in the Drosophila melanogaster embryo
负责人:
关键词:
synthetic gene networks;negative feedback;canalization;shuttling
DOI:
doi:10.5061/dryad.68864
摘要:
Background: A complex network of gene interactions controls gene regulation throughout development and the life of the organisms. Insights can be mad
Data from: Plasticity of promoter-core sequences allows bacteria to compensate for the loss of a key global regulatory gene
负责人:
关键词:
transcription regulatory networks;Experimental evolution;bacteria;Fitness;cAMP receptor protein;compensatory mutations
DOI:
doi:10.5061/dryad.d02sc44
摘要:
Transcription regulatory networks (TRNs) are of central importance for both short-term phenotypic adaptation in response
Data from: Regulatory gene networks that shape the development of adaptive phenotypic plasticity in a cichlid fish
负责人:
关键词:
evo-devo;cichlid;bone remodeling;pharyngeal jaw;developmental time-course;Astatoreochromis alluaudi
DOI:
doi:10.5061/dryad.rc638
摘要:
, and transcription factor binding site analysis was used to examine the prospective basis of their co-regulation. We propose a regulatory network of LPJ plasticity in cichlids, present
Data from: System-level insights into the cellular interactome of a non-model organism: inferring, modelling and analysing functional gene network
负责人:
关键词:
Glycine max
DOI:
doi:10.5061/dryad.0rv1m
摘要:
Cellular interactome, in which genes and/or their products interact on several levels, forming transcriptional regulatory-, protein interaction
Data from:A method for estimating Hill function-based dynamic models of gene regulatory networks
负责人:
关键词:
gene regulatory networks;optimization;Escherichia coli;parameter estimation
DOI:
doi:10.5061/dryad.ht047
摘要:
Gene regulatory networks (GRNs) are quite large and complex. To better understand and analyze GRNs, mathematical models are being employed
Data from: Dynamic interpretation of maternal inputs by the Drosophila segmentation gene network
负责人:
关键词:
gene regulatory networks;Bicoid;Pattern formation;drosophila melanogaster;gap genes
DOI:
doi:10.5061/dryad.2j9p4
摘要:
Patterning of body parts in multicellular organisms relies on the interpretation of transcription factor (TF) concentrations by genetic networks
Data from: Changes in gene expression during female reproductive development in a colour polymorphic insect
负责人:
关键词:
Ecdysone;epistasis;heterochrony;pleiotropy;regulatory network;sexual dimorphism
DOI:
doi:10.5061/dryad.g1jwstqnd
摘要:
with other loci and have pleiotropic effects on multiple traits. We quantified gene expression changes during ontogenetic colour development in a polymorphic
Data from: Robustness to noise in gene expression evolves despite epistatic constraints in a model of gene networks
负责人:
关键词:
epistasis;Models\/Simulations;Adaptation
DOI:
doi:10.5061/dryad.8c81j
摘要:
. Here we develop a new simulation model of gene networks to study the adaptive landscape underlying the evolution of robustness to noise. We find tha
Data from: An integrative computational approach for a prioritization of key transcription regulators associated with nanomaterial-induced toxicity
负责人:
关键词:
DOI:
doi:10.5061/dryad.3b025hh
摘要:
gene regulatory networks for each NM and BLM to capture functional hierarchical regulatory structures between genes and their regulators. Despite the different nature
Data from: The invariant nature of a morphological character and character state: insights from gene regulatory networks
负责人:
关键词:
combinations of states;character;character state;gene regulatory networks;structured Markov models;morphology;invariance
DOI:
doi:10.5061/dryad.2np959c
摘要:
s of phylogenetic analyses. Here, I show that, in the framework of Markov models, the modular structure of the gene regulatory network (GRN) underlying trait development

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