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Data from: Evolution and diversification of the organellar release factor family
- 负责人：
- DOI：
- doi:10.5061/dryad.2br48
- 摘要：
- and its stop codon usage tend to co-evolve, we find three taxa that encode an RF2 without using UGA stop codons, and one reverse scenario, where mamiellales
Data from: Purifying selection and molecular adaptation in the genome of Verminephrobacter, the heritable symbiotic bacteria of earthworms
- 负责人：
- DOI：
- doi:10.5061/dryad.9118
- 摘要：
- and showed no A-T bias. We characterized the strength of purifying selection (dN/dS) and codon usage bias in 876 orthologous genes. Symbiont ge
Data from: De novo assembly and comparative analysis of the Ceratodon purpureus transcriptome
- 负责人：
- DOI：
- doi:10.5061/dryad.5fm82
- 摘要：
- , while the codon usage was very similar between these two mosses, C. purpureus genes showed a slightly greater codon usage bias than P. patens genes potentially bec
Data from: Neurospora and the dead-end hypothesis: genomic consequences of selfing in the model genus.
- 负责人：
- DOI：
- doi:10.5061/dryad.4n9b4
- 摘要：
- of reduced codon usage bias in highly expressed genes of selfing Neurospora, but this result may be confounded by mutational bias. Potentially counteracting
Data from: Strong variations of mitochondrial mutation rate across mammals--the longevity hypothesis.
- 负责人：
- Nabholz, Benoit
- 关键词：
- DOI：
- doi:10.5061/dryad.82181
- 摘要：
- years of intensive usage, the extent of mitochondrial evolutionary rate variations across species, their practical consequences on sequence analysis method
Data from: Evaluating patterns of convergent evolution and trans-species polymorphism at MHC immunogenes in two sympatric stickleback species
- 负责人：
- DOI：
- doi:10.5061/dryad.7j1q0
- 摘要：
- of the coding and non-coding sequence. However, clustering was not habitat-specific and a codon-usage analysis revealed patterns of similarity by descent
Data from: Phylogenomic data yield new and robust insights into the phylogeny and evolution of weevils
- 负责人：
- DOI：
- doi:10.5061/dryad.42d3b
- 摘要：
- eling, codon usage and/or mutational bias to differences between trees reconstructed from amino acid and nucleotide sequences were explored. A reconstructed timetree
Data from: Evidence for complex selection on four-fold degenerate sites in Drosophila melanogaster
- 负责人：
- DOI：
- doi:10.5061/dryad.1pd2j
- 摘要：
- is fixed. The former has been explained by codon usage bias (CUB) favouring GC; the latter by decreased intensity of directional selection or by increased
Data from: Patterns and evolution of nucleotide landscapes in seed plants
- 负责人：
- Glémin, Sylvain
- DOI：
- doi:10.5061/dryad.p12305b2
- 摘要：
- s well known in plants. Most studies have focused on the GC-poor and homogeneous Arabidopsis genome and the much more GC-rich and heterogeneous rice (Oryza sativa) ge
Data from: Exome resequencing reveals signatures of demographic and adaptive processes across the genome and range of black cottonwood
- 负责人：
- DOI：
- doi:10.5061/dryad.7sb0f
- 摘要：
- and intronic sites were enriched for outliers compared with coding regions, while no outliers were found among intergenic sites. Codon usage bias was evident
