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Data from: The transcription factor Pou3f1 promotes neural fate commitment via activation of neural lineage genes and inhibition of externa
负责人:
关键词:
microarray;Oct6;Pluripotent stem cell;RNA-seq;Neural commitment;Mus musculus;ChIP-seq
DOI:
doi:10.5061/dryad.3vk1g
摘要:
ESC derivatives preferentially contribute to the neuroectoderm. Genome-wide ChIP-seq and RNA-seq analyses indicated that Pou3f1 is an upstream activator
Data from: Optimisation of next generation sequencing transcriptome annotation for species lacking sequenced genomes
负责人:
关键词:
Genomics\/Proteomics;Transcriptomics;molecular evolution;Bioinfomatics\/Phyloinfomatics
DOI:
doi:10.5061/dryad.2v3h4
摘要:
Next generation sequencing methods, such as RNA-seq, have permitted the exploration of gene expression in a range of organisms which hav
by next-generation sequencing
负责人:
关键词:
Natural Selection and Contemporary Evolution;Transcriptomics;Coregonus clupeaformis;molecular evolution;Fish;speciation
DOI:
doi:10.5061/dryad.1924
摘要:
ome an extremely valuable tool for the study of this process by allowing whole transcriptome sequencing, or RNA-Seq. We have conducted a 454 GS-FLX pyrose
Data from: Maternal stress has divergent effects on gene expression patterns in the brains of male and female threespine stickleback
负责人:
关键词:
RNA-seq;transcriptome;Maternal Effect;sex-dependent;sexual dimorphism;Gasterosteus aculeatus
DOI:
doi:10.5061/dryad.30ns8
摘要:
. To examine the mechanistic basis for these neurodevelopmental effects of maternal stress, we used RNA-seq to assess differential gene expression ac
Data from: Combining GWAS and RNA-seq approaches for detection of the causal mutation for hereditary junctional epidermolysis bullosa in sheep
负责人:
关键词:
Junctional Epidermolysis Bullosa aplasia cutis congenita integrin beta-4 sheep association mapping whole skin transcriptomic analysis
DOI:
doi:10.5061/dryad.4j7jh
摘要:
In this study, we demonstrate the use of a genome-wide association mapping together with RNA-seq in a reduced number of samples
Data from: A whole-transcriptome approach to evaluating reference genes for quantitative gene expression studies: a case study in Mimulus
负责人:
关键词:
reference genes;Mimulus luteus var. luteus;RNA-seq;normalization;quantitative RT-PCR;expression stability;Mimulus luteus;Mimulus guttatus
DOI:
doi:10.5061/dryad.84655
摘要:
-transcriptome approaches may be increasingly utilized for reference gene selection and validation. In this study, RNA-seq was used to identify a set of novel qPCR
Data from: Tissue-specific transcriptome characterization for developing tadpoles of the northern leopard frog (Lithobates pipiens)
负责人:
关键词:
RNA-seq;Tadpole development;Lithobates pipiens;transcriptome
DOI:
doi:10.5061/dryad.06bp2
摘要:
rall, transcript level changes across development were consistent with studies on Xenopus and our findings highlight the broader utility of using RNA-seq to identify genes
Data from: Identification of immunity-related genes in Dialeurodes citri against entomopathogenic fungus Lecanicillium attenuatum by RNA-seq analysis
负责人:
关键词:
DOI:
doi:10.5061/dryad.q2t18
摘要:
. However, the sound immune defense system of pests makes infection by an entomopathogenic fungus difficult. Here we used RNA sequencing technology (RNA-Seq
Data from: Small RNAs in rat sperm are a predictive and sensitive biomarker of exposure to the testicular toxicant ethylene glycol monomethyl ether.
负责人:
关键词:
toxicology;preconception;sperm;Rattus norvegicus;EGME;2ME;small RNA;testis;MAA
DOI:
doi:10.5061/dryad.30010gs
摘要:
nsitivity of molecular biomarkers of testicular toxicity to the traditional endpoints, small RNAs in the sperm were analyzed by next generation RNA-sequencing (RNA-seq). Adult rats

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