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Data from: Phylogenomics from whole genome sequences using aTRAM
- 负责人：
- DOI：
- doi:10.5061/dryad.26j38
- 摘要：
- used phylogenomic approaches involve some form of genome reduction. While these approaches make assembling phylogenomic data sets more economic
Data from: A targeted next-generation sequencing toolkit for exon-based cichlid phylogenomics
- 负责人：
- DOI：
- doi:10.5061/dryad.298qm
- 摘要：
- bioinformatics tools make such phylogenomics projects feasible for research groups that lack direct access to genomics facilities. We expect that these resources
Data from: Hierarchical Hybrid Enrichment: multi-tiered genomic data collection across evolutionary scales, with application to chorus frogs
- 负责人：
- DOI：
- doi:10.5061/dryad.0sf2hm8
- 摘要：
- Determining the optimal targets of genomic sub-sampling for phylogenomics, phylogeography, and population genomics remains a challenge
Data from: Selecting question-specific genes to reduce incongruence in phylogenomics: a case study of jawed vertebrate backbone phylogeny
- 负责人：
- DOI：
- doi:10.5061/dryad.47v40
- 摘要：
- Incongruence between different phylogenomic analyses is the main challenge faced by phylogeneticists in the genomic era. To reduce incongruence
Data from: Exon capture phylogenomics: efficacy across scales of divergence
- 负责人：
- DOI：
- doi:10.5061/dryad.34274
- 摘要：
- . High Throughput Sequencing (HTS) is now providing opportunities to incorporate thousands of loci in ‘phylogenomic’ studies. Here, we used target enrichment to sequence c.3000
Data from: Sequence Capture using PCR-generated Probes (SCPP): a cost-effective method of targeted high-throughput sequencing for non-model organisms
- 负责人：
- DOI：
- doi:10.5061/dryad.rk204
- 摘要：
- and phylogenetics of non-model organisms. To multiplex large numbers of indexed samples while sequencing predominantly orthologous, targeted regions of the ge
Data from: Weak phylogenetic signal in physiological traits of methane-oxidizing bacteria
- 负责人：
- DOI：
- doi:10.5061/dryad.6f27f
- 摘要：
- with the pmoA than with the 16S rRNA gene phylogeny. In conclusion, our results give evidence that approaches based solely on taxonomical inf
Data from: Phylogenomic analysis of BAC-end sequence libraries in Oryza (Poaceae)
- 负责人：
- Cranston, Karen A.
- DOI：
- doi:10.5061/dryad.1611
- 摘要：
- e as a model system for such “phylogenomic” studies. We describe the assembly of a phylogenomic data set from 800,000 bacterial artificial chromosome (BAC
Data from: Additional molecular support for the new chordate phylogeny
- 负责人：
- DOI：
- doi:10.5061/dryad.1850
- 摘要：
- Recent phylogenomic analyses have suggested tunicates instead of cephalochordates as the closest living relatives of vertebrates. In direct
Data from: Reticulate evolution in nuclear Middle America causes discordance in the phylogeny of palm?pitvipers (Viperidae: Bothriechis)
- 负责人：
- DOI：
- doi:10.5061/dryad.7n42q35
- 摘要：
- : Palm-Pitvipers (genus Bothriechis) Methods: We generated a phylogenomic dataset using an anchored phylogenomics approach and inferred a genomics-based
