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Data from: A whole-transcriptome approach to evaluating reference genes for quantitative gene expression studies: a case study in Mimulus
负责人:
关键词:
reference genes;Mimulus luteus var. luteus;RNA-seq;normalization;quantitative RT-PCR;expression stability;Mimulus luteus;Mimulus guttatus
DOI:
doi:10.5061/dryad.84655
摘要:
on the use of reliable, stably expressed reference genes. With the increased availability of high-throughput methods for measuring gene expression, whole
Data from: Genome-wide identification of microsatellites and transposable elements in the dromedary camel genome using whole genome sequencing data
负责人:
关键词:
Breeding strategies;Repetitive sequence;microsatellites;Next-generation sequencing;Camelus dromedarius;Transposable elements;de novo Assembly
DOI:
doi:10.5061/dryad.10h185k
摘要:
form approximately one-third of the camelid genomes, so study on this part of genome can be helpful in providing deeper information from the genome
Data from: PCR-based isolation of multigene families: lessons from the avian MHC class IIB
负责人:
关键词:
Musophagiformes;multi-gene families;Coraciiformes;Birds;Charadriiformes;Strigiformes;Major histocompatibility complex;Procellariformes;Ciconiformes;PCR-bias;Passeriformes;Columbiformes;Struthioniformes;Apodiformes;Piciformes;Accipitridae;Gruiformes
DOI:
doi:10.5061/dryad.1mn40
摘要:
with isolating MHCIIB genes from an unprecedented number of avian species from all over the avian phylogeny. We report important and usually underappreciated pr
Data from: The genome sequence and insights into the immunogenetics of the bananaquit (Passeriformes: Coereba flaveola)
负责人:
关键词:
Coereba flaveola;avian genomics;immune system;Toll-like receptor;Major histocompatibility complex;single nucleotide polymorphisms
DOI:
doi:10.5061/dryad.8182t
摘要:
with an assembly size of ca. 1.2 Gb, including approximately 16,500 annotated genes. Passerine birds, such as the bananaquit, are commonly infected by avian malaria
Data from: Integrated network analysis identifies fight-club nodes as a class of hubs encompassing key putative switch genes that induce major
负责人:
关键词:
Network analysis
DOI:
doi:10.5061/dryad.5h979
摘要:
We developed an approach that integrates different network-based methods to analyze the correlation network arising from large-scale gene expression
Data from: Recent population decline and selection shape diversity of taxol-related genes
负责人:
关键词:
conservation genetics;Taxus baccata;Adaptation;Gymnosperms;Population Genetics - Empirical
DOI:
doi:10.5061/dryad.4j7q3s0t
摘要:
ibly related to varying adaptive pressures produced by the host-enemy co-evolution on defense-related genes. Such natural selection processes may hav
Data from: Transcriptome analysis reveals novel patterning and pigmentation genes underlying Heliconius butterfly wing pattern variation
负责人:
关键词:
evo-devo;Pigmentation;melanin;Heliconius erato;ommochrome;Adaptation;genomics;Miocene;Pliocene;Pleistocene;Heliconius melpomene
DOI:
doi:10.5061/dryad.f76f3
摘要:
a wing. Here we took a large-scale transcriptomic approach to identify the network of genes involved in Heliconius wing pattern development and variation
Data from: The Rickettsia endosymbiont of Ixodes pacificus contains all the genes of de novo folate biosynthesis
负责人:
关键词:
nutritional interactions;MUMmer;bioinformatic;Ixodes pacificus;Rickettsia;de novo folate biosynthesis
DOI:
doi:10.5061/dryad.2jc88
摘要:
biosynthesis are present in the genome of Rickettsia buchneri in I. scapularis. To examine the metabolic capability of phylotype G021 in I. pacificus, genes
Data from: An improved hypergeometric probability method for identification of functionally linked proteins using phylogenetic profiles
负责人:
关键词:
Protein function prediction;functional similarity;phylogenetic profiles;functional annotation
DOI:
doi:10.5061/dryad.m6t4j
摘要:
. Phylogenetic profiling is a bioinformatics approach to identify the influence of a trait across species and can be employed to infer the evolutionary history
Data from: Testing a “genes-to-ecosystems” approach to understanding aquatic-terrestrial linkages
负责人:
关键词:
Genomics\/Proteomics;Species Interactions;Population Ecology;Community Ecology;Populus trichocarpa;Ecological Genetics
DOI:
doi:10.5061/dryad.1nq6m
摘要:
A ‘genes-to-ecosystems’ approach has been proposed as a novel avenue for integrating the consequences of intraspecific gene

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