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Data from: A new hierarchy of phylogenetic models consistent with heterogeneous substitution rates
负责人:
关键词:
ModelTest;Lie Markov models;model selection;phylogenetics;multiplicative closure
DOI:
doi:10.5061/dryad.461g6
摘要:
two-parameter model) or overly complex (the general Markov model). On a diverse set of biological data sets, we test a hierarchy of Lie Markov models spanning
Data from: Mechanisms of reciprocity and diversity in social networks: a modelling and comparative approach
负责人:
Puga-Gonzalez, Ivan
关键词:
grooming macaques social network
DOI:
doi:10.5061/dryad.6m220kd
摘要:
ter the social networks metrics observed in empirical data, but failed to reproduce some grooming patterns. The symmetry-based models, on the other hand, fitted bet
Data from: Modeling central metabolism and energy biosynthesis across microbial life
负责人:
关键词:
phylogenetic trees;metabolic models;core metabolism;pathway analysis
DOI:
doi:10.5061/dryad.gs51v
摘要:
in genome-scale metabolic models, and the need for extensive gapfilling to support complex biomass reactions, often results in predicting unrealistic yields or unrealistic
Data from: Nonlinear growth: an origin of hub organization in complex networks
负责人:
关键词:
complex networks;Network growth model;Hubs;Neural development;Rich-club organization
DOI:
doi:10.5061/dryad.6h8pm
摘要:
r, classical models of how hubs originate during network development unrealistically assume that new nodes attain information about the connectivity (for examp
Data from: Integral Projection Models for host-parasite systems with an application to amphibian chytrid fungus
负责人:
Mark Wilber
关键词:
Integral Projection Models macroparasite models microparasite models
DOI:
doi:10.5061/dryad.06sd9
摘要:
Host–parasite models are typically constructed under either a microparasite or macroparasite paradigm. However, this has long been recognized
Data from: Stochasticity and infectious disease dynamics: density and weather effects on a fungal insect pathogen
负责人:
关键词:
weather;biological control;environmental stochasticity;Population Ecology;2012;2011;Entomophaga maimaiga;2010;disease ecology;fungal pathogen;Lymantria dispar
DOI:
doi:10.5061/dryad.3nv3ss2
摘要:
In deterministic models of epidemics, there is a host abundance threshold, above which the introduction of a few infected individuals leads
Data from: Kakusan4 and Aminosan: two programs for comparing nonpartitioned, proportional, and separate models for combined mo
负责人:
关键词:
Phylogenetic Theory and Methods;insects;molecular evolution;Bioinfomatics\/Phyloinfomatics
DOI:
doi:10.5061/dryad.8646
摘要:
Proportional and separate models able to apply different combination of substitution rate matrix and among-site rate variation model to each locus ar
Data from: R2s for correlated data: phylogenetic models, LMMs, and GLMMs
负责人:
关键词:
coefficient of determination;Binomial regression;non-independent residuals;phylogenetic model;pseudo-likelihood
DOI:
doi:10.5061/dryad.345v6
摘要:
h as phylogenetic models and mixed models, defining an R2 faces two conceptual problems. (i) It is unclear how to measure the variance explained by predictor
Data from: How large spatially-explicit optimal reserve design models can we solve now? an exploration of current models’ computational efficiency
负责人:
关键词:
nature reserve design;spatial optimization;mixed integer programming;compactness;Computational efficiency;contiguity
DOI:
doi:10.5061/dryad.24080nk
摘要:
(or habitats) and these reserves display certain spatial attributes which are desirable for species. These models are formulated with linear 0-1 programmi
Data from: Statistical inference of allopolyploid species networks in the presence of incomplete lineage sorting
负责人:
关键词:
Pachycladon;allopolyploid;Bayesian;phylogenetics;Silene;hybridization;Brassicaceae;Caryophyllaceae;network
DOI:
doi:10.5061/dryad.nn3j4
摘要:
parameters into account. However, these models have not included allopolyploid hybridization and the special problems imposed when species trees of allopolyploids

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