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Data from: An efficient independence sampler for updating branches in Bayesian Markov chain Monte Carlo sampling of phylogenetic trees
- 负责人：
- DOI：
- doi:10.5061/dryad.63pm5
- 摘要：
- y for topological convergence. Inconsistent performance gains indicate that branch updates are not the limiting factor in improving topological convergence for the cu
Data from: The behavior of Metropolis-coupled Markov chains when sampling rugged phylogenetic distributions
- 负责人：
- DOI：
- doi:10.5061/dryad.584m3
- 摘要：
- ated by regions of low posterior density. Markov chain Monte Carlo (MCMC) algorithms are the most widely used numerical method for generating samples from these
Data from: Evolutionary tracking is determined by differential selection on demographic rates and density dependence.
- 负责人：
- DOI：
- doi:10.5061/dryad.w6m905qmg
- 摘要：
- , and selection on density dependence. Using a continuous-time Markov chain model to describe the stochastic dynamics of the logistic model of population growth
Data from: Ancestral character estimation under the threshold model from quantitative genetics
- 负责人：
- DOI：
- doi:10.5061/dryad.4t157
- 摘要：
- Markov chain Monte Carlo (MCMC) to sample the liabilities of ancestral and tip species, and the relative positions of two or more thresholds, from their joint posterior probability
Data from: Monte Carlo Strategies for selecting parameter values in simulation experiments
- 负责人：
- 关键词：
- phylogenetic analysis;Simulation;Markov chain Monte Carlo;Plant domestication;Importance sampling
- DOI：
- doi:10.5061/dryad.366j4
- 摘要：
- approaches can fare better in higher dimensions. We illustrate the framework with applications to phylogenetics and genetic archaeology.
Data from: Disentangling the formation of contrasting tree-line physiognomies combining model selection and Bayesian par
- 负责人：
- DOI：
- doi:10.5061/dryad.8422
- 摘要：
- l subset of processes required for tree-line formation. A Bayesian approach combined with Markov chain Monte Carlo methods was employed to obtai
Data from: Bayesian species delimitation can be robust to guide tree inference errors
- 负责人：
- DOI：
- doi:10.5061/dryad.m1r32
- 摘要：
- in the reversible-jump Markov chain Monte Carlo (rjMCMC) algorithm (Green, 1995). It has been pointed out that the method tends to over-split if a random population
Data from: Cladogenetic and anagenetic models of chromosome number evolution: a Bayesian model averaging approach
- 负责人：
- DOI：
- doi:10.5061/dryad.46m4b
- 摘要：
- of ancestral chromosome numbers over molecular phylogenies and generated new interest in studying the role of chromosome changes in evolution. Howeve
Data from: State-and-transition simulation models: a framework for forecasting landscape change
- 负责人：
- DOI：
- doi:10.5061/dryad.g58k0
- 摘要：
- interacting Markov chain in several important ways, including the ability to add discrete counters such as age and time-since-transition as state var
Data from: Implied weighting and its utility in palaeontological datasets: a study using modelled phylogenetic matrices
- 负责人：
- DOI：
- doi:10.5061/dryad.7dq0j
- 摘要：
- s of implied weighting on modelled phylogenetic data. We generated 100 character matrices consisting of 55 characters each using a Markov Chain morphology model
