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Data from: Trajectory energy minimisation for cell growth tracking and genealogy analysis
负责人:
关键词:
cell segmentation and tracking;level set framework;trajectory energy minimisation;E.coli;Time-lapse image analysis
DOI:
doi:10.5061/dryad.0q35m
摘要:
t published approaches, which often split segmentation and tracking into two independent procedures, we focus on designing an algorithm that describes
Data from: A combinatorial analysis using observational data identifies species that govern ecosystem functioning
负责人:
关键词:
assembly motif;functional composition;biodiversity;species clustering;Functional groups
DOI:
doi:10.5061/dryad.1v1k6rj
摘要:
of the observed ecosystems. We test this approach using experimental and simulated datasets. We show that our combinatorial analysis makes it possible to ident
Data from: An improved hypergeometric probability method for identification of functionally linked proteins using phylogenetic profiles
负责人:
关键词:
Protein function prediction;functional similarity;phylogenetic profiles;functional annotation
DOI:
doi:10.5061/dryad.m6t4j
摘要:
. Phylogenetic profiling is a bioinformatics approach to identify the influence of a trait across species and can be employed to infer the evolutionary history
Data from: DNA metabarcoding for high-throughput monitoring of estuarine macrobenthic communities
负责人:
关键词:
biomonitoring;Benthos;Estuaries;taxonomy;cytochrome c oxidase subunit I (COI);high throughput sequencing (HTS)
DOI:
doi:10.5061/dryad.2686c
摘要:
-throughput, and sometimes ambiguous, procedure. Despite DNA metabarcoding has been applied to marine benthos, a comprehensive approach providing species-level
Data from: An integrative approach for mapping differentially expressed genes and network components using novel parameters to elucidate
负责人:
关键词:
Mesozoic;Colorectal cancer;Homo Sapiens;bioinformatics;Systems biology;Biological Networks
DOI:
doi:10.5061/dryad.5b1j0
摘要:
crucial network components and many regulatory elements through a coordinated view. Using this integrative approach, the perceptive of complexity hidden
Data from: A novel open access web portal for integrating mechanistic and toxicogenomic study results
负责人:
关键词:
Systems biology;mechanism inference;gene expression analysis;toxicogenomics;toxicity prediction;: toxicogenomics
DOI:
doi:10.5061/dryad.159h65k
摘要:
ages. Integrating the two approaches would improve interpretation of toxicogenomic information. Barriers to the routine application of these methods in genome-wide
Data from: SNP-skimming: a fast approach to map loci generating quantitative variation in natural populations
负责人:
关键词:
Penstemon virgatus;multiplexed shotgun genotyping;Penstemon;genome-wide association;quantitative trait loci
DOI:
doi:10.5061/dryad.cp91mj7
摘要:
esent an approach to map loci within natural populations using inexpensive shallow genome sequencing. This 'SNP skimming' approach involves two steps
Data from: Solution of the Generalized Noah's Ark Problem
负责人:
关键词:
Taxon Selection;biodiversity conservation;Integer Programming;phylogenetic diversity;Noah's Ark Problem;experiments
DOI:
doi:10.5061/dryad.7q804
摘要:
ent taxa are not independent of each other. Computational results are presented to illustrate potentialities of the approach. Near-optimal solutions
Data from: Sampling strategy optimization to increase statistical power in landscape genomics: a simulation-based approach
负责人:
关键词:
landscape genomics;sampling strategy;stastistical power;false discovery rate;Sample size
DOI:
doi:10.5061/dryad.m16d23c
摘要:
tual environmental data in order to trial landscape genomics experiments under distinct sampling strategies. These strategies differed by design approach (to enhance

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