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Data from: Comparative analyses of clinical and environmental populations of Cryptococcus neoformans in Botswana
负责人:
关键词:
Fungi;Cryptococcus neoformans var. grubii;2012;Bioinfomatics\/Phyloinfomatics;Ecological Genetics;Population Genetics - Empirical
DOI:
doi:10.5061/dryad.tn28f
摘要:
Cryptococcus neoformans var. grubii (Cng) is the most common cause of fungal meningitis, and its prevalence is highest in sub-Saharan Afric
Data from: Catechol 2,3-dioxygenase and other meta-cleavage catabolic pathway genes in the ‘anaerobic’ termite gut spirochete Treponema primitia
负责人:
关键词:
Genomics\/Proteomics;Microbial Biology;insects;bacteria;Bioinfomatics\/Phyloinfomatics;Community Ecology
DOI:
doi:10.5061/dryad.5248s
摘要:
t do not directly catabolize aromatics but can contribute to the final pathway steps. Further, transcripts for each meta-pathway gene were expressed in stric
Data from: Whole genome sequencing shows sleeping sickness relapse is due to parasite regrowth and not reinfection
负责人:
关键词:
Genomics\/Proteomics;Parasitology;Biomedicine;Bioinfomatics\/Phyloinfomatics;Disease Biology;Trypanosoma brucei gambiense;Population Genetics - Empirical
DOI:
doi:10.5061/dryad.d58b8
摘要:
The trypanosome Trypanosoma brucei gambiense (Tbg) is a cause of human African trypanosomiasis (HAT) endemic to many parts of sub-Saharan Afric
Data from: Exon capture phylogenomics: efficacy across scales of divergence
负责人:
关键词:
Reptiles;Genomics\/Proteomics;skinks;Phylogenetic Theory and Methods;Bioinfomatics\/Phyloinfomatics;Eugongylus
DOI:
doi:10.5061/dryad.34274
摘要:
The evolutionary histories of species are not measured directly, but estimated using genealogies inferred for particular loci. Individual loci
Data from: Recent colonization of the Galapagos by the tree Geoffroea spinosa Jacq. (Leguminosae)
负责人:
关键词:
Quaternary;phylogeography;Bioinfomatics\/Phyloinfomatics;Geoffroea spinosa;Angiosperms;population dynamics;Population Genetics - Empirical
DOI:
doi:10.5061/dryad.87v741v0
摘要:
This study puts together genetic data and an Approximate Bayesian Computation (ABC) approach to infer the time at which the tree Geoffroea spinosa
Data from: Linkage disequilibrium network analysis (LDna) gives a global view of chromosomal inversions, local adaptation and geographic structure
负责人:
关键词:
Bioinfomatics\/Phyloinfomatics;Landscape Genetics;Anopheles baimaii;Population Genetics - Theoretical;Ecological Genetics;Gasterosteus aculeatus;Population Genetics - Empirical
DOI:
doi:10.5061/dryad.2t764
摘要:
clusters, SOCs), each comprising many loci connected by high LD. In A. baimaii, further population-genetic analyses supported the inference that each SOC
Data from: Global lack of flyway structure in a cosmopolitan bird revealed by a genome wide survey of single nucleotide polymorphisms
负责人:
关键词:
phylogeography;Birds;Bioinfomatics\/Phyloinfomatics;Anas platyrhynchos;Wildlife Management;Population Genetics - Empirical;Adaptation
DOI:
doi:10.5061/dryad.1bq39
摘要:
llard populations. We employed 363 single nucleotide polymorphism (SNP) markers in combination with population genetics and phylogeographic approaches to conduct
Data from: Seasonal diversity and dynamics of haptophytes in the Skagerrak, Norway, explored by high-throughput sequencing
负责人:
关键词:
Environmental DNA;metagenomics;Protists;Microbial Biology;Pavlovophyceae;Prymnesiophyceae;haptophytes;Bioinfomatics\/Phyloinfomatics;Haptophyta;population dynamics
DOI:
doi:10.5061/dryad.b8d21
摘要:
operational taxonomic units (OTUs), from c. 400.000 454 pyrosequencing reads, after rigorous bioinformatic filtering and clustering at 99.5%. Most OTUs represented uncultured
Data from: Tree imbalance causes a bias in phylogenetic estimation of evolutionary timescales using heterochronous sequences
负责人:
关键词:
Phylogenetic Theory and Methods;Evolutionary Theory;molecular evolution;Bioinfomatics\/Phyloinfomatics
DOI:
doi:10.5061/dryad.q4545
摘要:
Phylogenetic estimation of evolutionary timescales has become routine in biology, forming the basis of a wide range of evolutionary and ecologic
Data from: Challenges and strategies in transcriptome assembly and differential gene expression quantification. A comprehensive in silico assessment
负责人:
关键词:
Genomics\/Proteomics;Transcriptomics;molecular evolution;Bioinfomatics\/Phyloinfomatics;Ecological Genetics;Gene Structure and Function
DOI:
doi:10.5061/dryad.3t3n7
摘要:
ing), technological processing (sequencing error ?, library normalization) and bioinformatic workflow (de novo vs. mapping assembly, reference genome quality) impact

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