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Data from: A new Bayesian method for fitting evolutionary models to comparative data with intraspecific variation
负责人:
关键词:
Morphological Evolution;phylogenetics;Cyprinidae;Models\/Simulations
DOI:
doi:10.5061/dryad.7fv08k72
摘要:
d in empirical studies. In the present short article we will describe a new Bayesian method for fitting evolutionary models to comparative data that incorporates
Data from: Bayesian species delimitation can be robust to guide tree inference errors
负责人:
关键词:
species delimitation;guide tree;BPP;Simulation;MCMC
DOI:
doi:10.5061/dryad.m1r32
摘要:
The Bayesian method of species delimitation (Yang and Rannala, 2010) uses a so-called guide tree to reduce the number of models to be evaluated
Data from: Elevated substitution rate estimates from ancient DNA: model violation and bias of Bayesian methods
负责人:
关键词:
Demography;Bayesian;ancient DNA;mutation rate;coalescent simulation;heterochronous sequences
DOI:
doi:10.5061/dryad.1355
摘要:
timation of substitution rate using simulated samples of aDNA and mDNA. We conclude that the current models and priors employed in Bayesian MCMC analysis of heterochronous mtDNA
Data from: Genealogical working distributions for Bayesian model testing with phylogenetic uncertainty
负责人:
关键词:
working distribution;marginal likelihood;MCMC;phylogenetics;Bayes factor;Bayesian inference;coalescent model
DOI:
doi:10.5061/dryad.8tm76
摘要:
Marginal likelihood estimates to compare models using Bayes factors frequently accompany Bayesian phylogenetic inference. Approaches to es
Data from: A novel Bayesian method for inferring and interpreting the dynamics of adaptive landscapes from phylogenetic comparative data
负责人:
关键词:
Macroevolution;Reversible-jump models;Ornstein-Uhlenbeck models;Comparative Methods;Bayou
DOI:
doi:10.5061/dryad.t342m
摘要:
that adaptive hypotheses must be assigned a priori. Here we develop a reversible-jump Bayesian method of fitting multi-optima OU models to phylogenetic
Data from: Across population genomic prediction scenarios in which Bayesian variable selection outperforms GBLUP
负责人:
关键词:
Genomic prediction across population Bayesian variable selection GBLUP accuracy number of independent chromosome segments
DOI:
doi:10.5061/dryad.rq80k
摘要:
rrently disappointing. It has been shown for within population genomic prediction that Bayesian variable selection models outperform GBLUP models
Data from: Occupancy models for data with false positive and false negative errors and heterogeneity across sites and surveys
负责人:
关键词:
informative prior;imperfect detection;occupancy model;scenario;observation;phantom species;Mniotilta varia;detection probability;confirmed detection;hierarchical Bayesian model;Monte Carlo simulation
DOI:
doi:10.5061/dryad.t68v8
摘要:
hierarchical Bayesian models that utilize a subset of data with either confirmed detections of a species’ presence (CP model) or both confirmed presences and confirmed absences
ng Bayesian phylogeography and ecological niche modelling
负责人:
关键词:
Bayesian phylogeography;Demographic expansion;range expansion;Liolaemidae;Dispersal;Liolaemus darwinii;Squamata;Liolaemus;Monte Desert;Holocene;Pleistocene
DOI:
doi:10.5061/dryad.m81b5
摘要:
at ~55 ka based on Bayesian Skyline and Skyride Plots. In contrast, Bayesian relaxed models of spatial diffusion suggested that range expansion occurred
Data from: Bayesian hierarchical models suggest oldest known plant-visiting bat was omnivorous
负责人:
关键词:
phylogenetic regression;nectarivory;Phyllostomidae;Bayesian hierarchical models;Miocene;La Venta
DOI:
doi:10.5061/dryad.1168f
摘要:
and trophic specialization, remains unknown. We developed Bayesian models to infer skull length based on dental measurements. These models account for varia

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