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Data from: Integrated metabolomics and metagenomics analysis of plasma and urine identified microbial metabolites associated with
负责人:
关键词:
DOI:
doi:10.5061/dryad.s8k81
摘要:
and metagenomics technology are applied to discover new biomarkers from plasma and urine of 59 CHD patients and 43 healthy controls and trace their origin
Data from: Pan-genome dynamics of Pseudomonas gene complements enriched across hexachlorocyclohexane dumpsite
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关键词:
metagenomics;integron;Pseudomonas;Horizontal gene transfer;Comparative genomics;selective pressures
DOI:
doi:10.5061/dryad.nd154
摘要:
nated sites. Metagenomics data from pond sediment and recently surveyed HCH adulterated soils revealed the in situ enrichment of integron associated transposase ge
Data from: Shotgun mitogenomics across body size classes in a local assemblage of tropical Diptera: phylogeny, species diversity and mi
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关键词:
species richness;mitochondrial metagenomics;metabolic rates;phylogenetic diversity;Neutral Theory of biodiversity;rarity
DOI:
doi:10.5061/dryad.nm948
摘要:
Mitochondrial genomes can be assembled readily from shotgun-sequenced DNA mixtures of mass-trapped arthropods (“mitochondrial metagenomics
Data from: Cross-biome metagenomic analyses of soil microbial communities and their functional attributes
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关键词:
shotgun metagenomics soil microbial ecology 16S rRNA gene sequencing biogeography
DOI:
doi:10.5061/dryad.q2n78
摘要:
pool of living biomass in terrestrial ecosystems. We used metagenomic sequencing to compare the composition and functional attributes of 16
Data from: Using metagenomics to show the efficacy of forest restoration in the New Jersey Pine Barrens
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关键词:
wetlands;pine barrens;metagenomics;ITS;eDNA;COI;restoration;16S
DOI:
doi:10.5061/dryad.mt048
摘要:
4-year old AWC stands—the latter two stands being restored from long-term cranberry bogs. A metagenomic analysis of eDNA extracted from these soils sh
Data from: The impact of tropical forest logging and oil palm agriculture on the soil microbiome
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关键词:
Environmental DNA;metagenomics;bacteria;Agriculture;Community Ecology
DOI:
doi:10.5061/dryad.17n4d
摘要:
microbiome to these land-use changes are poorly understood. Using 16S rRNA gene and shotgun metagenomic sequencing, we compared composition
Data from: Ecological connectivity shapes quasispecies structure of RNA viruses in an Antarctic lake
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关键词:
Metagenomics Microbial Biology Molecular Evolution Genomics/Proteomics
DOI:
doi:10.5061/dryad.1dp6s
摘要:
micro-organisms in environmental samples. We report the first metagenomic study of RNA viruses in an Antarctic lake (Lake Limnopolar, Livingston Island
Data from: Auxotrophy and intra-population complementary in the 'interactome' of a cultivated freshwater model community
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关键词:
Genomics\/Proteomics;Population Ecology;bacteria;Community Ecology
DOI:
doi:10.5061/dryad.8f230
摘要:
ng a mixed culture from Lake Grosse Fuchskuhle. From a single shotgun metagenome of a freshwater mixed culture of low complexity, we recovered four high-quality
Data from: Metatranscriptomics of the human oral microbiome during health and disease
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关键词:
RNA-seq;infectious disease;metatranscriptomics;metagenomics;periodontitis;microbiome
DOI:
doi:10.5061/dryad.d41v4
摘要:
-associated microbial communities undergo conserved changes in metabolism during disease. Here we used patient-matched healthy and diseased samples
Data from: Deep mitochondrial origin outside the sampled alphaproteobacteria
负责人:
关键词:
Alphaproteobacteria;metagenomics;Mitochondria;Binning;Evolution;phylogenomics
DOI:
doi:10.5061/dryad.068d0d0
摘要:
tochondria evolved from a free-living group. Here we re-evaluate the phylogenetic placement of mitochondria. We employ genome-resolved binning of oceanic metagenome

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