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Data from: Increasing zooplankton size diversity enhances the strength of top-down control on phytoplankton through diet niche partitioning
- 负责人：
- Hsieh, Chih-hao
- 关键词：
- Size diversity Size spectrum Taxa diversity Biodiversity-ecosystem functioning Trophic interactions
- DOI：
- doi:10.5061/dryad.pt354
- 摘要：
- lessens the strength of top-down control (H3); increasing zooplankton taxonomic diversity enhances the strength of top-down control (H4); increasing
Data from: The global antigenic diversity of swine influenza A viruses
- 负责人：
- 关键词：
- DOI：
- doi:10.5061/dryad.5ff80
- 摘要：
- e is considerable diversity in both H1 and H3 influenza viruses circulating in swine due to the frequent introductions of viruses from humans and birds coupled
Data from: Cdk8 is required for establishment of H3K27me3 and gene repression by Xist and mouse development
- 负责人：
- DOI：
- doi:10.5061/dryad.tqjq2bvw0
- 摘要：
- silencing is observed in controls. Lack of Cdk8 impairs Ezh2 recruitment and establishment of histone H3 lysine 27 tri-methylation but not PRC1
Data from: Ecosystem interactions underlie the spread of avian influenza A viruses with pandemic potential
- 负责人：
- Justin Bahl
- 关键词：
- H3 H9 and H6 Subtype Virus Phylogeography Epidemiology Poultry Trade Wild Birds Statistical phylogenetics Bayesian inference
- DOI：
- doi:10.5061/dryad.601fd
- 摘要：
- Despite evidence for avian influenza A virus (AIV) transmission between wild and domestic ecosystems, the roles of bird migration and poultry trade in the spread of viruses remain enigmatic. In this study we integrate ecosystem interactions into a phylogeographic model to assess the contribution of wild and domestic hosts to AIV distribution and persistence. Analysis of globally sampled AIV datasets shows frequent two-way transmission between wild and domestic ecosystems. In general, viral flow from domestic to wild bird populations was restricted to within a geographic region. In contrast, spillover from wild to domestic populations occurred both within and between regions. Wild birds mediated long-distance dispersal at intercontinental scales whereas viral spread among poultry populations was a major driver of regional spread. Viral spread between poultry flocks frequently originated from persistent lineages circulating in regions of intensive poultry production. Our analysis of long-term surveillance data demonstrates that meaningful insights can be inferred from integrating ecosystem into phylogeographic reconstructions that may be consequential for pandemic preparedness and livestock protection.
Data from: Integrative taxonomy of the freshwater worm Rhyacodrilus falciformis s.l. (Clitellata: Naididae), with the description of a new species
- 负责人：
- DOI：
- doi:10.5061/dryad.1fb3d
- 摘要：
- ng an integrative approach, with three unlinked genetic markers [the mitochondrial cytochrome c oxidase subunit I (COI), the nuclear histone 3 (H3
Data from: A preliminary molecular phylogeny of shield-bearer moths (Lepidoptera: Adeloidea: Heliozelidae) highlights rich undescribed diversity
- 负责人：
- DOI：
- doi:10.5061/dryad.r51c7
- 摘要：
- is lacking. We generated the first molecular phylogeny of the family using DNA sequences of two mitochondrial genes (COI and COII) and two nuclear genes (H3
Data from: Large scale variation in birth timing and synchrony of a large herbivore along the latitudinal and altitudinal gradients
- 负责人：
- DOI：
- doi:10.5061/dryad.z8w9ghx8g
- 摘要：
- t matches the Hopkins’ Bioclimatic Law, and (H3) females adjust parturition timing to match the period of high energy demand with peak resource availability
Data from: Species co-occurrence networks show reptile community reorganization under agricultural transformation
- 负责人：
- DOI：
- doi:10.5061/dryad.3j7f6
- 摘要：
- landscapes and tested four key hypotheses that agricultural transformation leads to (H1) declines in species richness, (H2) altered assemblages, (H3) declines
Data from: The utility of CAD in recovering Gondwanan vicariance events and the evolutionary history of Aciliini (Coleoptera: Dytiscidae)
- 负责人：
- DOI：
- doi:10.5061/dryad.052ng
- 摘要：
- Background: Aciliini presently includes 69 species of medium-sized water beetles distributed on all continents except Antarctica. The pattern of distribution with several genera confined to different continents of the Southern Hemisphere raises the yet untested hypothesis of a Gondwana vicariance origin. The monophyly of Aciliini has been questioned with regard to Eretini, and there are competing hypotheses about the intergeneric relationship in the tribe. This study is the first comprehensive phylogenetic analysis focused on the tribe Aciliini and it is based on eight gene fragments. The aims of the present study are: 1) to test the monophyly of Aciliini and clarify the position of the tribe Eretini and to resolve the relationship among genera within Aciliini, 2) to calibrate the divergence times within Aciliini and test different biogeographical scenarios, especially if a Gondwana vicariance origin is plausible, and3) to evaluate the utility of the gene CAD (rudimentary) for phylogenetic analysis in Dytiscidae. Results: Our analyses confirm Aciliini as monophyletic and Eretini as the sister group, with high support. All six genera with multiple species are also supported as monophyletic. The origin of the tribe is firmly based on the Southern Hemisphere with the arrangement of Neotropical and Afrotropical taxa as the most basal clades suggesting a Gondwana vicariance origin. However, the uncertainty as to whether a fossil can be used as a stem- or crowngroup calibration point for Acilius influenced the result: as crowngroup calibration, the 95% HPD interval for the basal nodes included the geological age estimate for the Gondwana break-up, but as a stem group calibration the basal nodes were too young. Our study suggests CAD to be the most informative marker between 15 and 50 Ma. Notably, the 2000 bp CAD fragment analyzed alone fully resolved the tree with high support on all basal branches as well as for all genera as monophyletic. Conclusions: 1) Molecular data confirmed Aciliini as a monophyletic group. 2) Bayesian optimizations of the biogeographical history are consistent with an influence of Gondwana break-up history, but were dependent on the calibration method. 3) The evaluation using a method of phylogenetic signal, suggested Wnt and CAD as the most informative of our sampled genes per base pair.
Data from: Influential neighbours: seeds of dominant species affect the germination of common grassland species
- 负责人：
- DOI：
- doi:10.5061/dryad.mkkwh70wd
- 摘要：
- are expected to exert stronger influence than un-related species on the germination of neighbouring seeds; (H3) Facilitative interactions are more li
