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Data from: Accurate inference of tree topologies from multiple sequence alignments using deep learning
- 负责人：
- DOI：
- doi:10.5061/dryad.ct2895s
- 摘要：
- e accurately assess support for the chosen topology than bootstrap and posterior probability scores from traditional methods. While numerous practical chal
Data from: Phylogeny, palaeontology, and primates: do incomplete fossils bias the tree of life?
- 负责人：
- DOI：
- doi:10.5061/dryad.4g42q
- 摘要：
- eny reconstruction. We found a positive correlation between fossil completeness and topological congruence. Real fossil templates sampled for 36 or more of the 360 available morphological
Data from: Gene tree discordance causes apparent substitution rate variation
- 负责人：
- DOI：
- doi:10.5061/dryad.17k8j
- 摘要：
- to be longer or shorter, and we show that these branches can be predicted based on discordant tree topologies. Moreover, we observe that fixing a species tree topology
Data from: Bayes factors unmask highly variable information content, bias, and extreme influence in phylogenomic analyses
- 负责人：
- DOI：
- doi:10.5061/dryad.8gm85
- 摘要：
- . To better understand the causes and nature of this sensitivity, we analyzed several phylogenomic data sets using an alternative measure of topological
Data from: Resolving recent plant radiations: power and robustness of genotyping-by-sequencing
- 负责人：
- DOI：
- doi:10.5061/dryad.mp818
- 摘要：
- strong systematic bias, as revealed by the high statistical support for multiple alternative topologies depending on clustering threshold val
Data from: Bias in phylogenetic measurements of extinction and a case study of end-Permian tetrapods
- 负责人：
- DOI：
- doi:10.5061/dryad.208b1
- 摘要：
- on the sampling rate, and results can be highly variable across topologies. Clustering is often underestimated at low sampling rates, whereas at high sampling rate
Data from: The sampling and estimation of marine paleodiversity patterns: implications of a Pliocene model
- 负责人：
- DOI：
- doi:10.5061/dryad.42577
- 摘要：
- n the geologic ages of extant genera and the topology of molecular phylogenies—or the paleontological literature is such a distorted sample of tropical Pliocene
Data from: Phylogenomic analysis of a rapid radiation of misfit fishes (Syngnathiformes) using ultraconserved elements
- 负责人：
- DOI：
- doi:10.5061/dryad.v7f76
- 摘要：
- , Syngnathidae), which better agrees with morphological hypotheses than previously published topologies from molecular data. This result was supported by al
Data from: Model choice, missing data and taxon sampling impact phylogenomic inference of deep Basidiomycota relationships
- 负责人：
- 关键词：
- DOI：
- doi:10.5061/dryad.g0db883
- 摘要：
- ear to be the sole source of confounding signal. Our analyses suggest that topologies uniting smuts with mushroom-forming fungi can arise as a result of inappropria
Data from: The evolutionary root of flowering plants
- 负责人：
- DOI：
- doi:10.5061/dryad.vs49s
- 摘要：
- Correct rooting of the angiosperm radiation is both challenging and necessary for understanding the origins and evolution of physiological
