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Data from: A nutrient-driven tRNA modification alters translational fidelity and genome-wide protein coding across an animal genus
负责人:
关键词:
translational selection queuosine codon usage tRNA modification Akashi selection score
DOI:
doi:10.5061/dryad.1jn88
摘要:
ow by direct measurement, that a tRNA anticodon modification from guanosine to queuosine has coevolved with these genomic changes. Queuosine modification is present in mo
Data from: A multilocus timescale for oomycete evolution estimated under three distinct molecular clock models
负责人:
关键词:
Paleozoic;Mesozoic;molecular clock;Pythium;divergence times;Gene Regulation;oomycetes;Phytophthora;Bayesian inference
DOI:
doi:10.5061/dryad.39mc5
摘要:
a full complement of eukaryotic regulatory proteins, including those involved in histone modification, RNA interference, and tRNA and rRNA methylation; interesti
Data from: Using novel phylogenetic methods to evaluate mammalian mtDNA, including amino acid-invariant sites-LogDet plus site stripping, to detect
负责人:
关键词:
amino acid composition;statistical tests;LogDeterminant;tRNA;invariant sites;mammal phylogeny;mitochondrial DNA genomes
DOI:
doi:10.5061/dryad.401
摘要:
sites are ignored. LogDet amino acid distances, with modifications to take into account invariant sites, are combined with bootstrapping and the Neighbor
Data from: Evolutionary relationships within the Triops (Notostraca: Branchiopoda) using complete mitochondrial genomes
负责人:
关键词:
tadpole shrimp;phylogenetics;mitochondrial genome;Triops;Triops newberryi;Branchiopod;cryptic species;Triops longicaudatus \long\;Triops longicaudatus \short\
DOI:
doi:10.5061/dryad.v7h47
摘要:
,060 bp with 13 coding genes, 22 tRNA genes, 2 rRNA genes and a control region. Phylogenetic trees were constructed using previously sequenced Triops
Data from: Purifying selection and molecular adaptation in the genome of Verminephrobacter, the heritable symbiotic bacteria of earthworms
负责人:
关键词:
extracellular symbiont;purifying selection;genome reduction;symbiosis;Adaptation;Non-synonymous substitutions;positive selection;Evolution;Verminephrobacter
DOI:
doi:10.5061/dryad.9118
摘要:
, tRNA modification, and TonB-dependent iron uptake, potentially highlighting functions important in symbiosis. Our results suggest that the transition to symbiosis

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