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Data from: Markov-modulated continuous-time Markov chains to identify site- and branch-specific evolutionary variation in BEAST
- 负责人:
- DOI:
- doi:10.5061/dryad.230s5h0
- 摘要:
- extensions that accommodate heterogeneity of substitution rates across sites, heterogeneity in the process over time in a site-specific manner remains
Data from: Transcriptome sequencing reveals genome-wide variation in molecular evolutionary rate among ferns
- 负责人:
- DOI:
- doi:10.5061/dryad.rg22j
- 摘要:
- er previously documented heterogeneity in plastid substitution rates is reflected in their nuclear genomes. We then inquire whether variati
Data from: Inferring heterogeneous evolutionary processes through time: from sequence substitution to phylogeography
- 负责人:
- DOI:
- doi:10.5061/dryad.qp747
- 摘要:
- Molecular phylogenetic and phylogeographic reconstructions generally assume time-homogeneous substitution processes. Motivated by computati
Data from: Genomic Signature of an Avian Lilliput Effect across the K-PG Extinction
- 负责人:
- DOI:
- doi:10.5061/dryad.nr654
- 摘要:
- pronounced heterogeneity in rates of molecular evolution (varying up to ~20-fold) across a large-scale avian phylogenomic dataset, and show tha
Data from: Phylogenetic informativeness reconciles ray-finned fish molecular divergence times
- 负责人:
- DOI:
- doi:10.5061/dryad.3rq51
- 摘要:
- ss the Tree of Life. This discordance is attributed to a variety of variables including calibration age uncertainty, calibration placement, nucleotide substitution rate heterogeneity
Data from: Genetic distance for a general non-stationary Markov substitution process
- 负责人:
- DOI:
- doi:10.5061/dryad.g7g0n
- 摘要:
- sible model, with and without rate heterogeneity across sites, and the paralinear distance, an empirical pairwise method explicitly designed to address
Data from: The origin of modern frogs (Neobatrachia) was accompanied by acceleration in mitochondrial and nuclear substitution rates
- 负责人:
- DOI:
- doi:10.5061/dryad.3qd54
- 摘要:
- on in evolutionary biology. Although several earlier studies showed that modern frogs (Neobatrachia) experienced an acceleration of mitochondrial gene substitution rate
Data from: Evolution and Phylogeny of the Diptera: A Molecular Phylogenetic Analysis Using 28S rDNA Sequences
- 负责人:
- DOI:
- doi:10.5061/dryad.788
- 摘要:
- sequence comparisons, (3) significant substitution rate heterogeneity exists across sites, and (4) significant substitution rate heterogeneity exists among lineage
Data from: The fitness effect of mutations across environments: Fisher’s geometrical model with multiple optima
- 负责人:
- DOI:
- doi:10.5061/dryad.8dg19
- 摘要:
- ss heterogeneous conditions. As an example, we derive the genomic rate of substitution and of adaptation in a metapopulation divided into two distinct habitats in a high
Data from: Dissecting molecular evolution in the highly diverse plant clade Caryophyllales using transcriptome sequencing
- 负责人:
- DOI:
- doi:10.5061/dryad.33m48
- 摘要:
- ng a 1,122-gene data set with a gene occupancy of 92.1%. From the homolog trees, we found that both synonymous and nonsynonymous substitution rate