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Data from: Evaluating summary methods for multi-locus species tree estimation in the presence of incomplete lineage sorting
- 负责人：
- DOI：
- doi:10.5061/dryad.310q3
- 摘要：
- igned to address gene tree discordance. In this paper, we report on a study to evaluate MP-EST – one of the most popular species tree estimation methods des
Data from: When do species-tree and concatenated estimates disagree? An empirical analysis with higher-level scincid lizard phylogeny
- 负责人：
- 关键词：
- DOI：
- doi:10.5061/dryad.331jq
- 摘要：
- . We also found that relaxed-clock concatenated trees can be surprisingly similar to the species-tree estimate. Remarkably, the coalescent species-tree
Data from: Assessing the impacts of positive selection on coalescent-based species tree estimation and species delimitation.
- 负责人：
- DOI：
- doi:10.5061/dryad.5v3b5
- 摘要：
- ng this assumption in the form of species-specific positive selection when estimating species trees, species delimitations, and coalescent parameters under the model
Data from: Trans-species predictors of tree leaf mass
- 负责人：
- 关键词：
- DOI：
- doi:10.5061/dryad.mt40bc2
- 摘要：
- is challenging because leaf mass varies both within and between tree species and at different locations and points in time. Typically, models for estimating tree
Data from: Calibrating divergence times on species trees versus gene trees: implications for speciation history of Aphelocoma jays
- 负责人：
- DOI：
- doi:10.5061/dryad.1786
- 摘要：
- . Divergence times are estimated in the bird genus Aphelocoma to test whether speciation coincided with mountain uplift or glacial cycles. Gene trees and species trees
Data from: Robustness to divergence time underestimation when inferring species trees from estimated gene trees
- 负责人：
- DOI：
- doi:10.5061/dryad.65tn4
- 摘要：
- To infer species trees from gene trees estimated from phylogenomic data sets, tractable methods are needed that can handle dozens to hundreds of loci
Data from: Over the hills, but how far away? estimates of mushroom geographic range extents
- 负责人：
- DOI：
- doi:10.5061/dryad.fs38962
- 摘要：
- , we estimated range extents for species in four tree genera. Contrasting estimates from well-studied trees allowed us to test for potential biases
Data from: Effectiveness of phylogenomic data and coalescent species-tree methods for resolving difficult nodes in the phylogeny of advanced snakes
- 负责人：
- DOI：
- doi:10.5061/dryad.rb5nc
- 摘要：
- -tree estimation while taking into account stochastic genealogical discordance among loci. Recent methods for estimating species trees bypass
Data from: Coalescent species delimitation in milksnakes (genus Lampropeltis) and impacts on phylogenetic comparative analyses
- 负责人：
- DOI：
- doi:10.5061/dryad.420h7
- 摘要：
- Both gene-tree discordance and unrecognized diversity are sources of error for accurate estimation of species trees, and can affect downstream
Data from: SuperFine: fast and accurate supertree estimation
- 负责人：
- DOI：
- doi:10.5061/dryad.879st
- 摘要：
- Many research groups are estimating trees containing anywhere from a few thousand to hundreds of thousands of species, towards the eventual goal
