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Data from: Reliability assessment of null allele detection: inconsistencies between and within different methods
负责人:
关键词:
Rodentia;genotypes;root vole;genotyping errors;microsatellite loci;Microtus oeconomus;Heterozygosity;bottleneck;simulated genotypes;tundra vole;Arvicolidae;null alleles;natural populations
DOI:
doi:10.5061/dryad.4p41m
摘要:
d in a natural population of Microtus oeconomus sampled during 8 years, together with 1200 simulated populations without null alleles, but experiencing bottlenecks of varying
Data from: Simulated data for genomic selection and genome-wide association studies using a combination of coalescent and gene drop methods
负责人:
关键词:
genome-wide association studies (GWAS) shared data resources GenPred simulation method quantitative trait loci (QTL) pedigrees
DOI:
doi:10.5061/dryad.nm290
摘要:
(GWAS). The simulation method, implemented in a software package called AlphaDrop, can be used to simulate genomic data and phenotypes with flexibility
Data from: An upper bound for accuracy of prediction using GBLUP
负责人:
关键词:
simulated genotypes
DOI:
doi:10.5061/dryad.3k8g5
摘要:
or rare QTL alleles through simulations. Haplotypes derived from whole-genome sequence of 85 Caucasian individuals from the 1,000 Genomes Project were use
Data from: Genetic dissection of a genomic region with pleiotropic effects on domestication traits in maize reveals multiple linked QTL
负责人:
关键词:
genotypes maize phenotypes
DOI:
doi:10.5061/dryad.7sq67
摘要:
5 or more genes in the simulated data, the number of detected QTL can represent a simplification of the underlying causative factors. Our results sh
Data from: Detection of individual ploidy levels with genotyping-by-sequencing (GBS) analysis
负责人:
关键词:
Bioinfomatics;ploidy;Population Genetics - Theoretical;Bayesian inference;Phyloinfomatics
DOI:
doi:10.5061/dryad.5vs40
摘要:
ble. We explore the power and limitations of this method using simulated data sets and GBS data from natural populations of aspen (Populus tremuloides) known to inc
Data from: Re-imagining maize inbred potential: identifying breeding crosses using genetic variance of simulated progeny
负责人:
Beckett, Travis
关键词:
Genomic prediction maize breeding corn breeding North American commercial corn
DOI:
doi:10.5061/dryad.h825302
摘要:
ction certificates and 39 historically important North American dent inbreds, all test crossed to Iodent inbred PHP02. We used the R package ‘PopVar’ to simulate bi
Data from: Individual identification from genetic marker data: developments and accuracy comparisons of methods
负责人:
关键词:
conservation genetics;Duplicates;relationship;genetic markers;Population Genetics - Theoretical;Ecological Genetics;relatedness;Population Genetics - Empirical;clone
DOI:
doi:10.5061/dryad.2q3qh
摘要:
e then compared in accuracy by analysing an empirical frog data set and many simulated data sets generated under different parameter combinations. The analysis res
Data from: Linking genotype to phenotype in a changing ocean: inferring the genomic architecture of a blue mussel stress res
负责人:
关键词:
ocean acidification;Genomic architecture;Mytilus edulis;Mytilus;genome-wide association;calcification;Mytilus trossulus;climate change
DOI:
doi:10.5061/dryad.2d8b5
摘要:
in stress response. Here we use a genome-wide association approach (GWAS) to understand the genetic architecture of calcification rates under simulated climate stres
Data from: STRUCTURE is more robust than other clustering methods in simulated mixed-ploidy populations
负责人:
关键词:
polyploidy;admixture;Bayesian clustering;structure;population genetics
DOI:
doi:10.5061/dryad.6g635f6
摘要:
can theoretically lead to biased inference with (artefactual) clustering by ploidy. We used simulated mixed-ploidy (diploid-autotetraploid) data to syste
Data from: Genetic admixture and heterosis may enhance the invasiveness of common ragweed
负责人:
关键词:
Genetic admixture;intraspecific hybridization;biological invasion;heterosis;Outbreeding depression;Ambrosia artemisiifolia;common ragweed
DOI:
doi:10.5061/dryad.8b717
摘要:
, competition, simulated herbivory). Performance of admixed genotypes was highly variable, ranging from strong heterotic effects to weak outbreeding depressi

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