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Anchor: a novel approach for whole-genome comparative mapping utilising evolutionarily conserved DNA sequences"" data-category="" data-cropid="" data-dimen="" data-id="259A5B2C-B6B6-492D-834C-D41955585C5A"> Supporting data for "G-Anchor: a novel approach for whole-genome comparative mapping utilising evolutionarily conserved DNA sequences"
- 负责人：
- 关键词：
- Genome-Mapping Metabolomic Software Workflow whole-genome alignment sequence mapping sequencing anchoring highly conserved elements (hce) genome evolution
- DOI：
- doi:10.5524/100415
- 摘要：
- ent pipeline that uses a strictly limited but highly effective set of local sequence alignments to anchor (or map) an animal genome to another species\u2019
Data from: Ultraconserved elements anchor thousands of genetic markers for target enrichment spanning multiple evolutionary timescales
- 负责人：
- DOI：
- doi:10.5061/dryad.64dv0tg1
- 摘要：
- Although massively parallel sequencing has facilitated large-scale DNA sequencing, comparisons among distantly related species rely upon sma
Data from: Anchored hybrid enrichment for massively high-throughput phylogenomics
- 负责人：
- DOI：
- doi:10.5061/dryad.r606d128
- 摘要：
- es in DNA sequencing. Previous phylogenetic work has required labor-intensive marker development coupled with single-locus PCR and DNA sequencing on a clade-by-clade
Data from: Evaluating the performance of anchored hybrid enrichment at the tips of the tree of life: a phylogenetic analysis of Australian Eugongylus
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- 关键词：
- DOI：
- doi:10.5061/dryad.g4mj2
- 摘要：
- Background: High-throughput sequencing using targeted enrichment and transcriptomic methods enables rapid construction of phylogenomic data se
Data from: Towards improving searches for optimal phylogenies
- 负责人：
- DOI：
- doi:10.5061/dryad.89qf8
- 摘要：
- trees for our constrained search space. We show that, for sequences with compatible sites, the parsimony score of any tree T is at least the parsimony score of the anchor
Data from: A high-density linkage map for Astyanax mexicanus using genotyping-by-sequencing technology
- 负责人：
- DOI：
- doi:10.5061/dryad.6s718
- 摘要：
- generated from a single genotyping-by-sequencing project. We leveraged emergent genomic and transcriptomic resources to anchor hundreds of anonymous Astyanax
Data from: Large effect quantitative trait loci for salicinoid phenolic glycosides in Populus: implications for gene discovery
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- DOI：
- doi:10.5061/dryad.8h67t
- 摘要：
- ?salicortin. SSR markers and primer sequences were used to anchor the map to the V3.0 P. trichocarpa genome. We discovered 21 QTL for the two traits, inc
Data from: Genome assembly improvement and mapping convergently evolved skeletal traits in sticklebacks with genotyping-by-sequencing
- 负责人：
- DOI：
- doi:10.5061/dryad.q018v
- 摘要：
- s, providing a powerful system to map the genetic architecture of evolved traits. Here, we developed and applied a binned genotyping-by-sequencing (GBS) method
Data from: The de novo genome assembly and annotation of a female domestic dromedary of North African origin
- 负责人：
- DOI：
- doi:10.5061/dryad.v28f9
- 摘要：
- ced in technologies alternative to short-read sequencing to physically anchor scaffolds to genome maps.
Data from: A dense linkage map of Lake Victoria cichlids improved the Pundamilia genome assembly and revealed a major QTL for sex-determination
- 负责人：
- 关键词：
- RAD;recombination rate;sex chromosome evolution;Cichlidae;XY system;amh;sex determination;synteny
- DOI：
- doi:10.5061/dryad.59q56g6
- 摘要：
- mapping. In the present study we identified and genotyped markers via restriction-site associated DNA (RAD) sequencing and constructed a gene
