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Data from: Two low coverage bird genomes and a comparison of reference-guided versus de novo genome assemblies
- 负责人：
- DOI：
- doi:10.5061/dryad.qn1n2
- 摘要：
- of these assemblies by comparing CEGMA gene set representation, repeat element content, simple sequence repeat content, and GC isochore structure amo
Data from: A de novo chromosome-level genome assembly of Coregonus sp. “Balchen”: one representative of the Swiss Alpine whitefish radiation
- 负责人：
- DOI：
- doi:10.5061/dryad.xd2547ddf
- 摘要：
- for many species within Salmonidae, genomic resources for the subfamily Coregoninae are lacking. To assemble a whitefish reference genome, we carried
Data from: De novo sequencing, assembly, and annotation of four threespine stickleback genomes based on microfluidic partitioned DNA libraries
- 负责人：
- DOI：
- doi:10.5061/dryad.113j3h7
- 摘要：
- the availability of additional, independently sequenced and assembled genomes. We present here the assembly of four new stickleback genomes, based on the sequencing
Data from: Phylogenomics from whole genome sequences using aTRAM
- 负责人：
- DOI：
- doi:10.5061/dryad.26j38
- 摘要：
- ) and out-groups. We developed a pipeline to extract exon sequences from the aTRAM assemblies by annotating them with respect to the original target protein
Data from: Reference-free transcriptome assembly in non-model animals from next generation sequencing data
- 负责人：
- Cahais, Vincent
- DOI：
- doi:10.5061/dryad.5g32f94b
- 摘要：
- ropriate reference. Analyses showed that (i) the highest quality assemblies are obtained when 454 and Illumina data are combined, (ii) typical de novo assemblies inc
Data from: Chromosome-level assembly reveals extensive rearrangement in saker falcon and budgerigar, but not ostrich, genomes
- 负责人：
- DOI：
- doi:10.5061/dryad.q70q40m
- 摘要：
- The number of de novo genome sequence assemblies is increasing exponentially; however, relatively few contain one scaffold/contig per chromosome. Suc
Data from: Raw whole Drosophila genome sequence traces have contaminant sequences from bacterial symbionts
- 负责人：
- DOI：
- doi:10.5061/dryad.8085
- 摘要：
- e shared among the Drosophila genomes. However, we do not find evidence of bacterial sequences in two published Drosophila genome assemblies.
Data from: A NGS approach to the encrusting Mediterranean sponge Crella elegans (Porifera, Demospongiae, Poecilosclerida): transcriptome sequencing
- 负责人：
- Pérez-Porro, Alicia R.
- 关键词：
- Crella elegans de novo assembly transcriptome characterization Mediterranean sponge life cycle stages
- DOI：
- doi:10.5061/dryad.50dc6
- 摘要：
- assemblies. Three assemblies were based on sponge tissue of a particular life cycle stage, including non-reproductive tissue, tissue with sperm cysts
Data from: Improving Illumina assemblies with Hi-C and long reads: an example with the North African dromedary
- 负责人：
- Elbers, Jean P.
- 关键词：
- chromosome mapping chromosome conformation capture dromedary genome assembly scaffolding genome annotation
- DOI：
- doi:10.5061/dryad.6rp36b6
- 摘要：
- assemblies. One important livestock species of arid regions that does not have a high-quality contiguous reference genome is the dromedary (Camelus dromedarius
Data from: Genomics of Compositae crops: reference transcriptome assemblies, and evidence of hybridization with wild relatives
- 负责人：
- DOI：
- doi:10.5061/dryad.cp723
- 摘要：
- e experienced various levels of domestication. Here we have used next generation sequencing technology to develop 15 reference transcriptome assemblies
