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Data from: Knowledge-based prediction of protein backbone conformation using a structural alphabet
负责人:
关键词:
structural alphabet;Structure prediction;protein structures;structural bioinformatics;protein blocks
DOI:
doi:10.5061/dryad.3f5q5
摘要:
Libraries of structural prototypes that abstract protein local structures are known as structural alphabets and have proven to be very useful in var
Data from: Protein structure determination using metagenome sequence data
负责人:
关键词:
GREMLIN;protein;Pfam;co-evolution;Rosetta
DOI:
doi:10.5061/dryad.27p4s
摘要:
Despite decades of work by structural biologists, there are still ~5200 protein families with unknown structure outside the range
Data from: Sequence co-evolution gives 3D contacts and structures of protein complexes
负责人:
关键词:
protein interaction;Coevolution;evcomplex;E. coli
DOI:
doi:10.5061/dryad.6t7b8
摘要:
ions and structural biology has provided detailed functional insight for select 3D protein complexes. An alternative rich source of information about protein interact
Data from: Exploring the universe of protein structures beyond the Protein Data Bank
负责人:
关键词:
protein structure
DOI:
doi:10.5061/dryad.1922
摘要:
It is currently believed that the atlas of existing protein structures is faithfully represented in the Protein Data Bank. However, whether
Data from: On the ancestral recruitment of metalloproteinases into the venom of snakes
负责人:
关键词:
ancestral reconstruction;SVMP;ADAM;venom;toxin;metalloproteinase;Serpentes;Danio rerio;Homo Sapiens;molecular evolution;Anolis carolinensis
DOI:
doi:10.5061/dryad.fd5q0p68
摘要:
Tracing the evolutionary history of proteins can reveal insights into gene alterations responsible for changes in structure and function. Her
Data from: The NBS-LRR architectures of plant R-proteins and metazoan NLRs evolved in independent events
负责人:
Urbach, Jonathan M.
关键词:
NLR R-protein innate immunity evolution NOD-like receptors
DOI:
doi:10.5061/dryad.2nd84
摘要:
methods to infer a phylogeny of the NTPase domains of R-proteins, and reconstructed the domain structure of the protein containing the common ancestor
Data from: Cost of reproduction in the Queensland fruit fly: Y-model vs. lethal protein hypothesis
负责人:
关键词:
nutrition;protein;Bactrocera tryoni;carbohydrate;geometric framework
DOI:
doi:10.5061/dryad.2d7j0
摘要:
on lifespan (lethal protein hypothesis), we measured lifespan and egg production in Queensland fruit flies varying in reproductive status (mated, virgin
Data from: Manipulation of the N-terminal sequence of the Borna disease virus X protein improves its mitochondrial targeting and neuroprotect
负责人:
关键词:
DOI:
doi:10.5061/dryad.1rs12
摘要:
. We next took advantage of these findings and constructed mutant X proteins that were targeted only to the mitochondria. Such mutants exhibited enhanced
Data from: Identification of allosteric disulphides from labile bonds in X-ray structures
负责人:
关键词:
allosteric disulphides;complement;Coagulation;oxygen-sensing;redox
DOI:
doi:10.5061/dryad.84827
摘要:
Protein disulfide bonds link pairs of cysteine sulfur atoms and are either structural or functional motifs. The allosteric disulfides contro

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