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Data from: Allele phasing has minimal impact on phylogenetic reconstruction from targeted nuclear gene sequences in a case study of Artocarpus
- 负责人：
- 关键词：
- Artocarpus;incomplete lineage sorting;Target Enrichment;phylogenetics;allele phasing;HybSeq;alleles
- DOI：
- doi:10.5061/dryad.r8q72
- 摘要：
- heterozygous sequences do not contribute disproportionately to poor phylogenetic resolution and that the use of allele sequences for phylogeny reconstruction doe
Data from: Reconstructing phylogeny from reduced-representation genome sequencing data without assembly or alignment
- 负责人：
- DOI：
- doi:10.5061/dryad.r0hq0
- 摘要：
- r effects on phylogeny reconstruction using AAF. The AAF pipeline modified for RADseq or other reduced-representation sequencing data, phyloRAD, is availab
Data from: Effects of taxon sampling and tree reconstruction methods on phylodiversity metrics
- 负责人：
- DOI：
- doi:10.5061/dryad.5m9n159
- 摘要：
- s in taxon sampling and tree reconstruction methods. 2. To investigate the effects of taxon sampling and tree reconstruction methods on measures of phy
Data from: Vitis phylogenomics: hybridization intensities from a SNP array outperform genotype calls
- 负责人：
- DOI：
- doi:10.5061/dryad.4181f
- 摘要：
- h next generation sequencing and related technologies enable phylogeny reconstruction by providing unprecedented numbers of characters for analysis. One approach to SNP-based
Data from: Generation time, net reproductive rate, and growth in stage-age structured populations
- 负责人：
- DOI：
- doi:10.5061/dryad.3m5fc
- 摘要：
- -structured populations. Here we generalize this result to populations structured by stage and age by providing a new, unique measure of reproductive timing (Tc) that, al
Data from: Nuclear introns outperform mitochondrial DNA in inter-specific phylogenetic reconstruction: Lessons from horseshoe bats (Rhinoloph
- 负责人：
- DOI：
- doi:10.5061/dryad.s630c
- 摘要：
- d genetic markers for this purpose. Over the last decade, nuclear introns have been proposed as alternative markers for phylogenetic reconstruction. Howeve
Data from: Phylogenetic comparative methods for evaluating the evolutionary history of function-valued traits
- 负责人：
- DOI：
- doi:10.5061/dryad.5nd50
- 摘要：
- predictor variables to the trait of interest. Here, I introduce a method for extending ancestral state reconstruction to incorporate function-valued traits
Data from: High lability of sexual system over 250 million years of evolution in morphologically conservative tadpole shrimps
- 负责人：
- DOI：
- doi:10.5061/dryad.480cf
- 摘要：
- ne supermatrix for 30 taxa to produce a comprehensive phylogenetic reconstruction of Notostraca. Based on this phylogenetic reconstruction we use charact
Data from: A phylogenomic perspective on the biogeography of skinks in the Plestiodon brevirostris group inferred from targe
- 负责人：
- DOI：
- doi:10.5061/dryad.21j0n
- 摘要：
- ic reconstructions impacted by the use of different phylogenetic trees? Location: Mexico. Methods: We used target enrichment of ultraconserved elements (UC
Data from: Constructing phylogenies in the presence of Intra-Individual Site Polymorphisms (2ISPs) with a focus on the nuclear ribosomal cistron
- 负责人：
- DOI：
- doi:10.5061/dryad.21jj2
- 摘要：
- cribed spacers of the nuclear ribosomal cistron. Dealing with 2ISPs has been problematic as phylogeny reconstruction optimality criteria generally do not take account
