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Data from: The impact of paralogy on phylogenomic studies - a case study on annelid relationships
- 负责人：
- DOI：
- doi:10.5061/dryad.4js80
- 摘要：
- h analyses, but it is rarely assessed whether paralogous sequences have been erroneously grouped together as orthologous sequences after the prediction
Data from: Linkage mapping with paralogs exposes regions of residual tetrasomic inheritance in chum salmon (Oncorhynchus keta)
- 负责人：
- 关键词：
- tetrasomic inheritance;WGD;whole-genome duplication;Oncorhynchus keta;chum salmon;linkage mapping
- DOI：
- doi:10.5061/dryad.5b64r
- 摘要：
- Gene sequence similarity due to shared ancestry after a duplication event, that is paralogy, complicates the assessment of genetic var
Data from: Dealing with paralogy in RADseq data: in silico detection and single nucleotide polymorphism validation in Robinia pseudoacacia L.
- 负责人：
- DOI：
- doi:10.5061/dryad.qn4br
- 摘要：
- e or no prior information on the genome. However, many questions remain about the biases inherent to this technology. Notably, sequence misalignments arising from paralogy ma
Data from: Gene duplication, population genomics and species-level differentiation within a tropical mountain shrub
- 负责人：
- DOI：
- doi:10.5061/dryad.n3jk5
- 摘要：
- Gene duplication leads to paralogy, which complicates the de novo assembly of genotyping-by-sequencing (GBS) data. The issue of paralog
Data from: Using genomic location and coalescent simulation to investigate gene tree discordance in Medicago L.
- 负责人：
- DOI：
- doi:10.5061/dryad.85c0s
- 摘要：
- paralogy or other causes leading to extremely discordant gene trees.
Data from: Addressing incomplete lineage sorting and paralogy in the inference of uncertain salmonid phylogenetic relationships
- 负责人：
- DOI：
- doi:10.25338/B8DC81
- 摘要：
- . Relationships within the euteleost fish family Salmonidae have proven challenging to resolve in molecular phylogenetics studies in part due to ancestral
Data from: Comprehensive phylogeny of ray-finned fishes (Actinopterygii) based on transcriptomic and genomic data
- 负责人：
- DOI：
- doi:10.5061/dryad.5b85783
- 摘要：
- out of 72 ray-finned fish orders. We apply phylogenetic tests designed to trace the effect of whole-genome duplication events on gene trees and find paralogy
Data from: Integrating sequence evolution into probabilistic orthology analysis
- 负责人：
- DOI：
- doi:10.5061/dryad.4r910
- 摘要：
- Orthology analysis, that is, finding out whether a pair of homologous genes are orthologs — stemming from a speciation — or paralogs — stemming from
Data from: Unsorted homology within locus and species trees
- 负责人：
- 关键词：
- Gene duplication and loss;homology;gene family;Species tree;Locus tree;incomplete lineage sorting
- DOI：
- doi:10.5061/dryad.87k57
- 摘要：
- y relationships have been defined at the molecular level: orthology, paralogy and xenology. In brief, if two gene copies arose by duplication they are paralog
Data from: Lineage-specific mapping of quantitative trait loci
- 负责人：
- 关键词：
- DOI：
- doi:10.5061/dryad.23r11
- 摘要：
- y of QTLs by apparent co-location, lineage specific mapping of QTL can classify homology into (1) orthology (shared origin of QTL) versus (2) paralogy
